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Detailed information on CNT30145996


BLAST search results

BLAST vs Swiss-Prot:
sp|P27774|KPPR_MESCR, E-value = 1e-85

BLAST vs NONCODE:
NONMTRT001255, E-value = 9e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691096Medicago truncatulaOryza sativa45.9719.5482.45188forward
CNT30670674Medicago truncatulaSetaria viridis45.9726.4879.26188forward
CNT30513083Medicago truncatulaJuglans regia64.0659.6881.3262forward
CNT30372685Medicago truncatulaArabidopsis thaliana21.7622.0887.6489forward
CNT30628885Medicago truncatulaVigna unguiculata83.8682.0685.71343forward
CNT30708150Medicago truncatulaGlycine max72.1354.4386.1295forward
CNT30565281Medicago truncatulaActinidia chinensis58.4451.0784.52239forward
CNT3087966Medicago truncatulaVigna radiata7858.4285.27319forward
CNT30552726Medicago truncatulaOryza glaberrima59.1748.6980.99242forward
CNT30608349Medicago truncatulaGossypium raimondii43.2834.9883.62177forward
CNT30595838Medicago truncatulaOryza meridionalis59.1748.8980.99242forward
CNT30369615Medicago truncatulaOryza glumipatula43.7732.3781.01179forward
CNT30644238Medicago truncatulaCannabis sativa52.0880.0882.16213forward
CNT30575421Medicago truncatulaOryza barthii59.1733.780.99242forward
CNT30116076Medicago truncatulaOryza nivara59.1733.780.99242forward
CNT30114771Medicago truncatulaEutrema salsugineum35.2137.783.33144forward

Expression of CNT30145996

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MIINRFLNRNTLFNSFNLFIHKIKIISSWIKCSNTFLFSTSSIQRMVIIQTYHSGCVTDKCV*

Sequence

>CNT30145996
AATTCCGGTTTTTGACCTTCAATGACCAAGATTTTGGGTGGTTTAATAAGCTCAGGAGGATCTAAAAGACCAGTAACATGATTATAAATAGGTTTTTGAA
CAGAAACACCCTCTTTAATAGCTTTAACTTGTTCATACATAAGATCAAAATCATTAGCTCTTGGATCAAGTGCAGTAACACCTTTCTCTTTTCTACCAGT
TCTATCCAAAGAATGGTAATCATCCAAACATATCACAGTGGTTGTGTCACTGATAAGTGTGTTTGAGTCAGGATTTCCACCTTTTGGTGGTTCTGCTGCA
CCTCCAAAAACACTTGTGAGTCTTCTCATGAAAGTACTTTTTCCACATCCTGAATCAGCTGCTAGACCAATCACAATTGTCTGTGAGTCACCTGCTCCAC
ATGTTATCA