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Detailed information on CNT30145938


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT000497, E-value = 4e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697733Medicago truncatulaOryza sativa6.627.8587.62105forward

Expression of CNT30145938

Peptides detected in this lncRNA

>peptide 1 (76 aa)
IILLSFHFLLTFFPSTIYYFSPHFLFQAKHTLKFSTFFYTLLSQKSEHPSSLFPLSHVFLSFTPTITYFTFVAKSS*

>peptide 2 (86 aa)
NYPTFISLSLNFLSFNNLLFFPTLSFSSQTHPKIFHIFLHSSLTKIRTSLFSLPPLSRVPFFHSHHYLFHFCSKIKLEMTFQVVEK*

>peptide 3 (32 aa)
MTKLWINLLYKWFMGLSIYVGTSLLNAWSKLI*

Sequence

>CNT30145938
AATTATCCTACTTTCATTTCACTTTCTCTTAACTTTCTTTCCTTCAACAATTTACTATTTTTCCCCACACTTTCTTTTTCAAGCCAAACACACCCTAAAA
TTTTCCACATTTTTCTACACTCTTCTCTCACAAAAATCAGAACATCCCTCTTCTCTCTTCCCCCTCTCTCACGTGTTCCTTTCTTTCACTCCCACCATTA
CCTATTTCACTTTTGTAGCAAAATCAAGCTAGAAATGACATTTCAAGTTGTAGAAAAGTGATTTTTGTGTTGTGTTTTGAGCATTAGAGGCAAGCTTGAG
CAAGAAACAAGAATATTGAAGCTAGGGTTTGGCTTGGCAAGAAGATTGAGGCAGGGGCTGAATGTAAGTATAAGTGATTAATAGCTTAAATTGAGGTAAA
AGTGATTATTTTGAGAAGCAATTCAAGTTATGTTGATTGATTAGATGTATAAGTTGTTACTGACTTTGGGATTCTATGATGAATCTGTTTTTGGGCTGTT
AGTAGTATAAATTTTGTCGTTGTTGCTGTTTGGAATGAAAAGCTAAAAGTTAAAAGCCATAAGTTGTTCCAAAAGCTTCCGTAGTTGATTATTGGGTTAA
ATATGTTAGAATTTATTTATTACTGGTGTAGGAGCTGTGTATACATATTTTATTTGATTCTGGAAAATTTGAGTTGAAATTGAATTGTCTAGAGGTCATA
AGCTGTCAGTAAGCTGTTTTGGGAATTTTGCCTTAAATGACTAAGTTGTGGATTAACCTTCTGTATAAGTGGTTCATGGGGCTGAGTATATATGTTGGAA
CATCTTTGCTGAATGCTTGGTCGAAATTAATTTGATAGAAGCCATAAGCTGCTAGTTAAGCTGTTTGGAAGTGCTTAAATAGCCAAACGACGTACTTCTG
GTGCAAGGACTGAAATTGAAATTTTTGTGTATGCTGGTTGATGAAGTAAGAGTACATCACAAATGAGTTGAGTTGTTTTGGAAAGAGCAAGACCTATAAG
CCAAGACATAAGCTATTTTGGAAAATGGATTATGGAGTTTTGGACTAGCAAAAGCTGCAAATTTTGGATAAGCTGCTTGCAATTTCGGGACTAATTCCAA
GAAATAACACTTGGAAAGGGTGGACAATTAGCTAGAGCGGCTGGTGCTGTAGCGAAATTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTT
CTGGAGAGATCGTTTGATATCAAAAAACTGCTCAGCAACAGTAGGACAAGTAGGGAATGTTGGAGTAAACCAAAAAAGTTTGGGCAGAGCCAGAGCTAAA
CGTTGGTTAGGTAAGCGCTCAGTTGACAAAATGCATGTCTATTAAACTTGTTTATGATTGATGATTTAGGAGAATATTTTGATACGTGATAAGTGAGTCA
TATATGTATGAAGAAAAAAAAGCACAAACTTTGGTCTGCAATAGATGAAATATGTGAGAATGCAAATAAAGGAACTAATAGTTAAGGTTTCAAATTAGAA
AGGCAAGAAAGTTTGCATCCTTATTTATTTTTCAATACATGTTGACATATGTATATCTCTGTATTGAAATCATTTGATTGTCATTGTTTTTA