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Detailed information on CNT30145793


BLAST search results

BLAST vs Swiss-Prot:
sp|P12353|PSAD_SPIOL, E-value = 1e-104

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710333Medicago truncatulaGlycine max70.6349.281.31428forward
CNT30171560Medicago truncatulaTrifolium pratense76.5757.5785.99464forward
CNT30356274Medicago truncatulaLactuca sativa66.1761.579.8401forward
CNT30410573Medicago truncatulaPapaver somniferum67.6645.6184.39410forward

Expression of CNT30145793

Peptides detected in this lncRNA

>peptide 1 (73 aa)
SKHYQSLHIKRLLTSKFNLNWANILPNRPEILTNPLTTRVNLLRVHTILRMQILNLTIRKNPVKLILNLVLRP*

>peptide 2 (31 aa)
ASIINPYTSKGCLPVNLTSIGLTFFPIDLKF*

Sequence

>CNT30145793
AGCAAGCATTATCAATCCTTACACATCAAAAGGTTGCTTACCAGTAAATTTAACCTCAATTGGGCTAACATTCTTCCCAATAGACCTGAAATTCTGACCA
ACCCCTTGACGACCAGGGTTAACCTTCTCAGGGTACACACCATCCTTAGGATGCAAATATTGAACCTCACCATTAGGAAAAACCCTGTAAAACTGATACT
TAATCTTGTACTTAGACCTTAATCTATTTCCTAAAGCCAAACACTGTTCTTTCCTTGCTAACTTAAGAAGGTTAGGACCTTCTCTCATTATGGCTGCACC
ACCAGTTGGCATCTCAAAGATTTGTTCCTTAGGTGACTCCCATGTGATCACATAGAATTCTTCAACTTGTGCCTTACGTAACAATCCACCAGTGCTTCCT
CCAAAGATTGGTGAAGGTGTGTTTGGGTCTAGTTCAGGTGGAGTAAAACCAACTGGTGCAGCAGGAGCTTCTTCTTTTGTTGTAACTGATGCTGCTTCTG
TTTTCTCATCTGCAGCTGAGATTTTTGTTGTTTTTGTTGTGAACTTGATGGGTTTGAGAGAGATGAAGGATAAAGTTGATGGTTGTTTCCATGAGTACCA
GTACAC