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Detailed information on CNT30145784


BLAST search results

BLAST vs Swiss-Prot:
sp|P30077|CHS9_MEDSA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700733Medicago truncatulaQuercus lobata25.6566.0378.06278forward
CNT30524897Medicago truncatulaPhaseolus vulgaris53.1493.8184.03576forward
CNT30628825Medicago truncatulaVigna unguiculata76.0188.2284.95824forward
CNT3045136Medicago truncatulaPrunus dulcis18.1731.6781.22197forward
CNT30171495Medicago truncatulaTrifolium pratense51.7568.3388.59561forward
CNT30646903Medicago truncatulaRosa chinensis43.6335.7879.7473forward
CNT30355633Medicago truncatulaLactuca sativa17.0733.8882.7185forward
CNT30151821Medicago truncatulaPrunus persica18.1734.283.25197forward
CNT30573473Medicago truncatulaVitis vinifera14.3930.6583.33156forward
CNT30705527Medicago truncatulaPrunus avium19.144.7181.64207forward
CNT30644974Medicago truncatulaCannabis sativa31.7342.8481.69344forward
CNT3022855Medicago truncatulaPopulus trichocarpa25.6540.1280.22278forward

Expression of CNT30145784

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MSITRTTECHCSNFRTNNQHTSTFIVLSQVLGQTKHRPTCKTSLLVHHIPLHIWTKT*

>peptide 2 (49 aa)
MAPSLSGAIVCAVQTISNIGFSISGIGSEPTMSAAAPSPNSACPTRLSK*

>peptide 3 (39 aa)
MSTPLVVQKIKCVIFDFGWPHSFIAFTAASFPSLGPSAL*

>peptide 4 (29 aa)
MLDQLHEGDHQWLPHCLEQLFVQSKPSQI*

Sequence

>CNT30145784
TAATAAAGTTAATCACAACTATATTATTTAATTTGAATATGACCGTACAATGAGTTTTTTTTTCTTCCTTACATAAAAATAAAGCAAATTTAAAAGTGAT
AAATGGAAATAAATATGATTAAGCATCTTATATAGCTACACTGCGCAAGACAACAGTCTCAATGGTAAGTCCTGGTCCAAAGCCGAACAACACACCCCAA
TCAAGCCCTTCTCCTGTGGTCTTAAGCCCCTCTTGAGAAGATTTCTTTCGCATCTCATCTAAGATAAACAATACACATGCACTTGACATGTTACCATATT
CACTAAGTACTTCTCTAGTGGCTTTCATCTTTTCAGGTTTTAAGCCTAACTTTTGTTCAACTTGATCAAGAATTGCGGGTCCACCTGGATGAGCAATCCA
AAAGATTGAGTTGTAATCAGAAATGTTTAATGGTTGGAAAGCATCGATCAATGCTTTATCAATGTTCTTTGAAACAATCCCAGGAACATCTTTAAGAAGG
TGAAATGTTAGACCAGCTTCACGAAGGTGACCATCAATGGCTCCCTCACTGTCTGGAGCAATTGTTTGTGCAGTCCAAACCATCTCAAATATAGGTTTCT
CAATTTCTGGTATTGGGTCAGAACCAACAATGAGTGCAGCAGCACCATCTCCAAATAGTGCTTGTCCAACAAGACTGTCCAAATGAGTATCACTAGGACC
ACGGAATGTCACTGCAGTAACTTCAGAACAAACAACCAACACACGAGCACCTTTATTGTTCTCAGCCAAGTCCTTGGCCAAACGAAGCACCGTCCCACCT
GCAAAACATCCTTGTTGGTACATCATATACCTCTTCACATATGGACGAAGACCTAAGAGTTTGGTGAGTTGGTAATCAGCGCCAGGCATGTCTACACCAC
TTGTGGTGCAAAAGATCAAGTGTGTAATCTTTGATTTTGGTTGGCCCCATTCTTTTATAGCTTTCACTGCAGCCTCCTTTCCTAGTCTAGGGCCTTCTGC
CCTCTGAGCCTTGCGAATTTCAGATACACTCACCATCTTGATATGGTTCACAGTACTTTGTTGTATAAAAGGAAAAGGCTGAAG