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Detailed information on CNT30145769


BLAST search results

BLAST vs Swiss-Prot:
sp|P25794|PIP2_PEA, E-value = 2e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549105Medicago truncatulaIpomoea triloba50.8232.5181.62185forward
CNT3020673Medicago truncatulaCitrullus lanatus22.87.8187.9583forward
CNT30728378Medicago truncatulaCorchorus capsularis24.18788.6488forward
CNT30631130Medicago truncatulaVigna unguiculata23.636.8683.7286forward
CNT30502187Medicago truncatulaNicotiana attenuata51.925.281.48189forward
CNT30609232Medicago truncatulaGossypium raimondii46.9832.283.04171forward
CNT30478156Medicago truncatulaArabidopsis halleri19.5124.9185.9271forward
CNT30423559Medicago truncatulaPapaver somniferum52.240.3482.63190forward
CNT30328555Medicago truncatulaAsparagus officinalis21.1522.8590.9177forward
CNT3038976Medicago truncatulaCucumis melo22.812.1587.9583forward
CNT30334008Medicago truncatulaCynara cardunculus21.4334.6788.4678reverse complement
CNT3050391Medicago truncatulaCucumis sativus22.2512.7486.4281forward

Expression of CNT30145769

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAQTKGHLGFELLSQVVVFLGICWLLETHPVL*

Sequence

>CNT30145769
TGAGATTCCAGCAGTACAGTAAACAAGAGCAAAGATCATGCCACCAAAAGCCCAAGCAATTCCTTGAATACCCACAGTCTTACACTTAGAATCAGCTCTA
ACAACACCCATAACAGTCAAAACAGTGATATAAAGAAAAAGGAAAGTAGCAACGAACTCAGCTATCCCAGCTCTGTAGAAAGACCATGAAGTGAGTTCAG
ATGGCTCAAACAAAGGGTCATCTTGGCTTTGAGCTGCTATCCCAAGTGGTTGTCTTTCTGGGAATTTGTTGGCTCCTAGAGACACATCCTGTTCTTTAGC
TTCCATTTTTGTTCTTAGGTTTGGGGTTTTGGATTGTGTACTTGTGTTTTGTTTGTTGTGTGAG