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Detailed information on CNT30145698


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SZ15|LIP5_ARATH, E-value = 5e-21

BLAST vs NONCODE:
NONGMAT000583, E-value = 3e-73

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526145Medicago truncatulaPhaseolus vulgaris59.0557.7683.42398forward
CNT30196083Medicago truncatulaPisum sativum44.0767.3590.24297forward
CNT30711352Medicago truncatulaGlycine max95.188.4185.49641forward
CNT3085832Medicago truncatulaVigna radiata71.0790.2182.25479forward
CNT30620574Medicago truncatulaCajanus cajan24.3341.7381.1164forward
CNT30175619Medicago truncatulaVigna angularis60.6896.0182.64409forward
CNT30723343Medicago truncatulaLupinus angustifolius44.2152.3785.91298forward

Expression of CNT30145698

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MVILGRWRRMVFLGRWWVMIILGRWRRMVVLGRINSRCIRVR*

>peptide 2 (43 aa)
WYVGVVGLGSGTVPFLLLELFWVFNEWFVVRGADWEEYEASGP*

>peptide 3 (48 aa)
MEEDGSLGKDKLQVYKSEMMEKQWKNAYYHLPYHETAKMVECLQNFDH*

>peptide 4 (49 aa)
MLIIIYPIMKLQRWWNVCRILIIKSVVEFRCRRNAWQILVVDRVMITMC*

Sequence

>CNT30145698
CTGGTATGTCGGAGTTGTTGGCTTGGGTTCTGGGACAGTACCATTTCTGCTGCTGGAACTGTTTTGGGTATTTAATGAATGGTTTGTAGTCAGAGGAGCT
GACTGGGAAGAATATGAAGCATCGGGCCCTTGATAATAAGTGTGGTTTACTGGTACCGACGGTAGGCTGCTTTCTGTAAAACTTGGATAAGATTGAAAAT
GGGGAAGAGAGTAAGGAGGGGGAGTTTCGTGAGAAGGGTAATTGGGACCTAAATTCTGTGACTGATCTGGTGAGTATTGTTGGTGGTTGTAGGGCTCGGA
ATAAGAACTGTCTGATCTTGCAGGTGGAGGCTGATGGTAATCTTGGGAAGGTGGAGGAGGATGGTATTCTTGGGAAGGTGGTGGGTGATGATAATCCTGG
GAAGATGGAGGAGGATGGTAGTCTTGGGAAGGATAAACTCCAGGTGTATAAGAGTGAGATGATGGAGAAACAATGGAAGAATGCTTATTATCATTTACCC
TATCATGAAACTGCAAAGATGGTGGAATGTTTGCAGAATTTTGATCATTAAGAGTGTCGTTGAATTTAGGTGCAGGAGGAATGCTTGGCAGATTCTGGTA
GTTGACAGGGTTATGATAACCATGTGTTGAATCGGATTCTGACCCAGCACCAGAAGCAGAAGTTTCAGTAGTCC