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Detailed information on CNT30145669


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8RWV0|TKTC1_ARATH, E-value = 1e-43

BLAST vs NONCODE:
NONCSAT000820, E-value = 1e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30216618Medicago truncatulaKalanchoe fedtschenkoi36.1533.4884.4277forward
CNT30127978Medicago truncatulaCorymbia citriodora41.7843.8486.5289forward
CNT30353399Medicago truncatulaEragrostis tef48.8321.0183.65104forward
CNT30325590Medicago truncatulaAsparagus officinalis50.235.5783.18107forward
CNT3035293Medicago truncatulaCucumis melo93.4333.1781.41199forward

Expression of CNT30145669

Peptides detected in this lncRNA

>peptide 1 (45 aa)
LAFSISVLYPNHMPSKCLKTLINILSECNFSVTINRNVVIIIKCN*

Sequence

>CNT30145669
CCTAGCTTTTAGTATTTCCGTTCTTTACCCAAATCACATGCCATCCAAGTGCCTCAAAACGTTGATCAACATTCTCAGTGAATGCAATTTCAGTGTCACC
ATCAATAGAAATGTGGTTATCATCATAAAATGCAATTAGCTTTCCAAGACCCCAATGTCCGGCAAGTGAACACGCTTCATTTGAAATTCCTTCCATTTGA
CAACCATCTCCCA