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Detailed information on CNT30145616


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30530404Medicago truncatulaEucalyptus grandis44.0556.3480.5200forward
CNT30499549Medicago truncatulaCoffea canephora44.7141.4384.24203forward
CNT30615836Medicago truncatulaSesamum indicum44.4952.7483.17202forward
CNT30503775Medicago truncatulaNicotiana attenuata89.4391.6582.51406forward
CNT30223417Medicago truncatulaHordeum vulgare24.0148.0284.4109forward
CNT30511842Medicago truncatulaSolanum lycopersicum58.8158.382.77267forward
CNT30231964Medicago truncatulaAnanas comosus38.9914.5183.05177forward
CNT30411763Medicago truncatulaPapaver somniferum86.1234.6983.38391forward
CNT30570592Medicago truncatulaVitis vinifera44.7162.8583.74203forward
CNT3055709Medicago truncatulaAmborella trichopoda48.0233.3382.11218forward
CNT30319856Medicago truncatulaAsparagus officinalis16.326.4389.1974forward
CNT30574680Medicago truncatulaOryza barthii35.4617.5880.75161forward
CNT30115589Medicago truncatulaOryza nivara35.4611.2880.75161forward
CNT3050773Medicago truncatulaCucumis sativus8770.2882.28395forward

Expression of CNT30145616

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MNRGSRASQVIDLINFKKNRFNNIMSNKFKIGITNMMNNILFPSSKIIINHDHIITSFNQTIHKMTSNETSSTGNQYSLLSLAFQSNGQWNS

>peptide 2 (42 aa)
TNRINIAPVSLSLRVLKWITVHLTCTSQQKSCTHSLCQSQHV*

Sequence

>CNT30145616
ACCAATAGGATTAACATTGCCCCAGTAAGTCTCAGCTTGAGGGTGTTGAAGTGGATCACCGTACACCTCACTTGTACTAGTCAGCAAAAATCGTGCACCC
ACTCTCTTTGCCAATCCCAACATGTTTAGTGTCCCCACCACATTCGATATGATGGTCTTGACAGGATTAAACTTGTAATGAACAGGGGAAGCAGGGCAAG
CCAAGTGATAGATCTGATCAACTTCAAGAAGAATAGGTTCAACAACATCATGTCTAATAAGTTCAAAATTGGGATTACCAATATGATGAACAACATTCTC
TTTCCTTCCAGTAAAATAATTATCAATCACGATCACATTATCACCTCTTTCAATCAAACGATCCACAAGATGACTTCCAACGAAACCAGCTCCACCGGTA
ACCAGTACTCTCTTCTGTCTCTTGCTTTTCAATCCAACGGCCAATGGAACTCTT