Detailed information on CNT30145515


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640424Medicago truncatulaNymphaea colorata22.046.590.7454forward
CNT30282953Medicago truncatulaChenopodium quinoa22.0414.3288.8954reverse complement
CNT30728842Medicago truncatulaCorchorus capsularis34.2924.2186.984forward
CNT3070603Medicago truncatulaQuercus suber29.3918.9593.0672forward
CNT30404916Medicago truncatulaBeta vulgaris32.2419.5184.8179forward
CNT30525480Medicago truncatulaPhaseolus vulgaris30.613.5186.6775forward
CNT30632211Medicago truncatulaVigna unguiculata41.6333.5591.18102forward
CNT30710681Medicago truncatulaGlycine max45.7115.4792.86112forward
CNT3044723Medicago truncatulaPrunus dulcis25.316.7995.1662forward
CNT3084566Medicago truncatulaVigna radiata25.3110.5388.7162forward
CNT30552699Medicago truncatulaOryza glaberrima27.7617.385.2968forward
CNT30436604Medicago truncatulaAegilops tauschii34.2910.4584.5284forward
CNT3062229Medicago truncatulaArabidopsis lyrata26.5314.1387.6965forward
CNT30653715Medicago truncatulaRosa chinensis37.5515.7884.7892forward
CNT30213185Medicago truncatulaHelianthus annuus4017.7284.6998forward
CNT30355349Medicago truncatulaLactuca sativa25.3110.3388.7162forward
CNT30704435Medicago truncatulaPrunus avium25.319.3896.7762forward
CNT30644102Medicago truncatulaCannabis sativa28.9816.3287.3271forward
CNT30319296Medicago truncatulaAsparagus officinalis2011.0689.849forward
CNT30120512Medicago truncatulaCitrus clementina33.8827.7691.5783forward
CNT3035626Medicago truncatulaCucumis melo31.0213.5785.5376forward
CNT30724415Medicago truncatulaLupinus angustifolius32.6513.9193.7580forward

Expression of CNT30145515

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKTANPMGIPSVPLRISGREDSVDKNKGTNDFST*

Sequence

>CNT30145515
CTGATCATCCCAAATTTTGCCGTCGTTGTAGATCACGGCTGATCCGAAACTTCTTGCCGGGTTAATACCGGTGCCGGTAACGGGGATAGTAGCCAAGTGA
ACCATGAAAACAGCAAATCCAATGGGAATCCCTAGCGTTCCTCTTAGGATCAGTGGCAGAGAAGACAGTGTAGACAAGAACAAAGGTACCAATGATTTCA
GCACCTAAAGCTGTGCCTTTGTTGTAGCCATCATGTACAAAGTTG