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Detailed information on CNT30145472


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT002043, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30312696Medicago truncatulaCamelina sativa85.7266.2981.841597forward
CNT3061767Medicago truncatulaArabidopsis lyrata48.955.7982.66911forward

Expression of CNT30145472

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSCHLQAAFQQKSTFAGLGGYPPCPVSWP*

>peptide 2 (61 aa)
MSLCWSGGIPSLSCILALTLSMVSELSTSRVIVFPVRVFTNICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30145472
TCTTAAAAGCTGATACGAGAGCAAATAGTTCCCATTCATTAAGTAAAAAACTAGAACAGAATCATACACAAGAAATAAAACGATAGTTTTCCAGGGCCAT
TACGGACCCGTTAGGGCCACAAGTTCTAAAACATAAAACTAACAACTGTAGAAGTTCAACACATGATAAGAGCTAAGCAACATTCACATTCTTAAAATCC
ACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAAC
CTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGTCTTACCGG
TCAACGTCTTCACAAAGATCTGCATACCTCCCCTCAGACGAAGGACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGCCAATGTCCTGCCATC
TTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGTATCTTGGCCTTGACATTATCAATAGTGTCCGAGCTC
TCTACCTCCAAAGTAATTGTTTTGCCTGTGAGTGTCTTAACAAAAATCTGCATACCACCGCGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGA
TGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGC
CTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGCAAG
ACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGG
GAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAA
AATCTGCATACCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCA
GCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAA
TTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAG
AGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATC
GTGTCCGAGCTCTCTACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGTCGCAAAACGAGATGAAGAGTTG
ACTCTTTCTGGATGTTATAATCGGCCAATGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTC
TTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCATACCACCA
CGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGC