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Detailed information on CNT30145435


BLAST search results

BLAST vs Swiss-Prot:
sp|P28400|RBL_DILIN, E-value = 4e-42

BLAST vs NONCODE:
NONCQUT000007, E-value = 1e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30489969Medicago truncatulaOlea europaea26.84.9590.7297forward
CNT30225846Medicago truncatulaHordeum vulgare32.8710.4989.08119forward
CNT30598581Medicago truncatulaFraxinus excelsior33.9834.8496.75123forward
CNT3018021Medicago truncatulaZea mays51.384.7988.17186forward
CNT30605440Medicago truncatulaGossypium raimondii34.5330.5698.4125forward
CNT30100001Medicago truncatulaOryza rufipogon50.2870.5489.01182forward

Expression of CNT30145435

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MSITFMHNFHTKVSTVNNISPGVNYTTLTINYGL*

Sequence

>CNT30145435
TGGAGCCTCGACCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGGTTAATAATATCAGCCCAG
GTGTTAATTACACGACCTTGACTATCAACTACGGATTGTAGAAAAAAATACCGCGACTTCTATCTTTTTCAACAAAATCATCACGTAGTAAATCAACAAA
ACCTAAAGTAATATCCCTTTCTCCTTCCAGTTTACCTACTACAGTACCAGCGTGAATATGATCTCCACCTGACATACGTAACGCTTTAGCTAATACACGA
AAGTGCATACCATGATTTTTCTGTCTATCAATAACTGCATGCATTGCACGTTTCCTGAGTGT