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Detailed information on CNT30145381


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT002043, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30330420Medicago truncatulaDioscorea rotundata57.351.9582.03879forward

Expression of CNT30145381

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSNVMVFPVKVFTKICMPPLKRRTR*

>peptide 2 (60 aa)
MEGGLLLDVIISKGTPILQLLASKNQTLLVWRDPFFVLNLGLNIVNCIGALHLKGDCLSCE

>peptide 3 (29 aa)
MSCHLQAAFQQKSTFAGLGGYPPCPVSWP*

>peptide 4 (61 aa)
MSLCWSGGIPSLSCILALTLSMVSELSTSRVIVFPVRVFTNICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30145381
TGATACGAGAGCAAATAGTTCCCATTCATTAAGTAAAAAACTAGAACAGAATCATACACAAGAAATAAAACGATAGTTTTCCAGGGCCATTACGGACCCG
TTAGGGCCACAAGTTCTAAAACATAAAACTAACAACTGTAGAAGTTCAACACATGATAAGAGCTAAGCAACATTCACATTCTTAAAATCCACCACGAAGA
CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGAT
CTGGTGGGATTCCCTCCTTATCCTGTATTTTTGCCTTAACATTATCAATGGTGTCTGAGCTTTCCACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTT
CACAAAGATCTGCATGCCTCCCCTCAAACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGCCAATGTCCTGCCATCTTCAAGCTGC
TTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGTATCTTGGCCTTGACATTATCAATAGTGTCCGAGCTCTCTACCTCCA
AAGTAATTGTTTTGCCTGTGAGTGTCTTAACAAAAATCTGCATACCACCGCGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATC
AGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTG
TCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGCAAGACAAGGTGAA
GAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTC
CTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATA
CCACCACGAAGTCGCAAAACGAGATGAAGAGTTGACTCTTTCTGGATGTTATAATCGGCCAATGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGA
GCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCC
AGTGAGAGTCTTCACAAATATTTGCATACCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCTA
TCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGGATCCCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGC
TCTCCACCTCAAGGGTGATTGTCTTTCCTGTGAG