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Detailed information on CNT30145276


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 8e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629041Medicago truncatulaVigna unguiculata12.5520.7183.8793forward
CNT30712006Medicago truncatulaGlycine max19.4330.1990.28144forward
CNT30599147Medicago truncatulaFraxinus excelsior11.6127.1383.7286forward
CNT3027583Medicago truncatulaPopulus trichocarpa14.1721.9785.71105forward
CNT30174473Medicago truncatulaVigna angularis13.2338.4384.6998forward

Expression of CNT30145276

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MPKMLALRAVQRHAAASRSTRGYWWFTQS*

>peptide 2 (68 aa)
MLQPRDQQGVTGGLPKVKFNNPLRTLAHTPSLRASRGHVPLEGVGLGLGFGFGLGFGFGVGFGVGLHE*

>peptide 3 (74 aa)
LICQSNKSHHFTILDFLRYTYISKHRDFIFCNILTRQNKFWMERLYNEPLITIHARTRIKHSSKELKKPTKNDK*

Sequence

>CNT30145276
ATTAATTTGTCAATCAAATAAATCACACCACTTCACAATATTAGATTTCTTGCGATATACATATATAAGCAAGCATAGAGATTTTATTTTTTGTAATATT
CTTACAAGACAAAATAAATTTTGGATGGAAAGATTATATAACGAGCCGTTAATAACCATCCATGCACGTACAAGAATCAAACACTCATCAAAGGAATTAA
AAAAACCAACAAAAAACGACAAATAGCACAACCATACATTGATATGATATTATTTTTTGTGTGTACGCCATATGCACATTTAAGCACATTGAAAATCATG
TGGGACTTTCCTTGAGCAAACATTGAGAAGCAAGCTTAGTGAAATTGGAAGGTTGAGATTAATGCCCAAAATGTTAGCTTTAAGGGCAGTGCAAAGGCAT
GCTGCAGCCTCGAGATCAACAAGGGGTTACTGGTGGTTTACCCAAAGTTAAATTCAACAACCCACTTAGGACATTGGCACATACACCAAGTTTGAGAGCA
TCACGTGGGCATGTGCCACTTGAAGGGGTTGGGTTAGGGTTAGGGTTTGGGTTTGGCCTTGGCTTTGGTTTTGGGGTTGGGTTTGGAGTAGGGTTGCATG
AATAGGAACCACAAGCTGAAACAAGTGAAAAAAAGAGGAGGTTGATTGTGAGGAAAATAGCAAGGGAGGAACAAGTTTTGGAAGCCATCTTAATTAAATT
ATTCTTGTACTAGCTAAGTTGCTATTAGAGCTTAATTAAGA