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Detailed information on CNT30145248


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT002043, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Medicago truncatulaQuercus lobata64.1986.3681.591260forward
CNT30500417Medicago truncatulaCoffea canephora54.7153.3382.51074forward
CNT30615929Medicago truncatulaSesamum indicum57.1133.5182.521121forward
CNT30279009Medicago truncatulaChenopodium quinoa76.4198.17821500forward
CNT30636316Medicago truncatulaCapsicum annuum58.0754.9983.681140forward
CNT30538027Medicago truncatulaBrassica napus68.2670.6881.941340forward
CNT30238962Medicago truncatulaBrassica oleracea44.8845.5884.11881forward
CNT30511508Medicago truncatulaSolanum lycopersicum56.6585.0282.821112forward
CNT3079055Medicago truncatulaBrassica juncea50.0890.7782.91983forward
CNT30460578Medicago truncatulaSaccharum spontaneum54.253.1782.331064forward
CNT30623461Medicago truncatulaDaucus carota81.2564.1982.011595forward
CNT30480747Medicago truncatulaArabidopsis halleri46.5178.7182.04913forward
CNT30326890Medicago truncatulaAsparagus officinalis46.4673.9184.1912forward
CNT30330410Medicago truncatulaDioscorea rotundata38.6185.4683.77758forward
CNT30595410Medicago truncatulaEragrostis curvula56.3481.09831106forward

Expression of CNT30145248

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSLCWSGGIPSLSCILALTLSMVSELSTSRVIVFPVRVFTNICIPPRRRSTKWRV

>peptide 2 (31 aa)
MVSELSTSNVMVFPVKVFTKICMPPLKRRTR*

>peptide 3 (29 aa)
MSCHLQAAFQQKSTFAGLGGYPPCPVSWP*

Sequence

>CNT30145248
GGGCCATTACGGACCCGTTAGGGCCACAAGTTCTAAAACATAAAACTAACAACTGTAGAAGTTCAACACATGATAAGAGCTAAGCAACATTCACATTCTT
AAAATCCACCACGAAGACGCAAAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCGGCCAAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAA
GATCAACCTCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGTATTTTTGCCTTAACATTATCAATGGTGTCTGAGCTTTCCACCTCCAATGTAATGGTC
TTTCCTGTCAAAGTCTTCACAAAGATCTGCATGCCTCCCCTCAAACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGCCAATGTCC
TGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGTATCTTGGCCTTGACATTATCAATAGTGTC
CGAGCTCTCTACCTCCAAAGTAATTGTTTTGCCTGTGAGTGTCTTAACAAAAATCTGCATACCACCGCGAAGACGCAAGACAAGGTGAAGAGTTGACTCT
TTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAA
TCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAG
ACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGG
TCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT
TTACAAAAATCTGCATACCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTG
TTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCC
AAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAAT
CAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTTACATT
GTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCATACCACCACGAAGACGCAAGACAAGGTGA
AGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCT
CCTTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT
ACCACCACGAAGTCGCAAAACGAGATGAAGAGTTGACTCTTTCTGGATGTTATAATCGGCCAATGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATG
AGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTC
CAGTGAGAGTCTTCACAAATATTTGCATACCACCACGAAGACGGAGCACCAAATGGAGGGTGG