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Detailed information on CNT30145111


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06GM9|PETD_PIPCE, E-value = 1e-40

BLAST vs NONCODE:
NONSTUT000261, E-value = 9e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618210Medicago truncatulaSesamum indicum23.4950.7291.43105reverse complement
CNT30407229Medicago truncatulaBeta vulgaris23.4930.790.48105forward
CNT30632290Medicago truncatulaVigna unguiculata70.2562.4388.22314forward
CNT30199286Medicago truncatulaPisum sativum85.6854.0288.77383forward
CNT30504292Medicago truncatulaNicotiana attenuata42.5110.6591.58190forward
CNT30708642Medicago truncatulaGlycine max39.3736.992.61176forward
CNT3090412Medicago truncatulaSolanum tuberosum42.518.6188.42190forward
CNT30193370Medicago truncatulaSecale cereale42.0611.6490.96188forward
CNT30286546Medicago truncatulaTriticum aestivum42.0612.6891.49188forward
CNT30395700Medicago truncatulaTriticum turgidum22.1521.3491.9299forward
CNT30556068Medicago truncatulaOryza glaberrima42.5125.8990.53190forward
CNT30435040Medicago truncatulaAegilops tauschii42.0620.9191.49188forward
CNT30662532Medicago truncatulaTriticum dicoccoides42.0627.2989.36188forward
CNT30309624Medicago truncatulaCamelina sativa41.3943.8489.19185forward
CNT30230699Medicago truncatulaAnanas comosus42.5132.5391.58190forward
CNT30655374Medicago truncatulaRosa chinensis42.5132.5991.58190forward
CNT30215737Medicago truncatulaHelianthus annuus42.5162.392.11190forward
CNT30679835Medicago truncatulaTriticum urartu21.927.6488.7898forward
CNT30622073Medicago truncatulaCajanus cajan42.5147.3894.21190forward
CNT30419844Medicago truncatulaPapaver somniferum42.5131.8393.16190forward
CNT3025179Medicago truncatulaPopulus trichocarpa42.5123.7592.11190forward
CNT30104480Medicago truncatulaOryza rufipogon42.5137.4890190forward

Expression of CNT30145111

Peptides detected in this lncRNA

>peptide 1 (36 aa)
QTDLRVPQSLMVREPLSLRYRQSYLELLQEKYIKDR*

>peptide 2 (43 aa)
ANGSAGSPIIDGSRTAKPTLQAIVPRITTGKIYKRSLGHAGSP*

Sequence

>CNT30145111
GCAAACGGATCTGCGGGTTCCCCAATCATTGATGGTTCGAGAACCGCTAAGCCTACGTTACAGGCAATCGTACCTAGAATTACTACAGGAAAAATATATA
AAAGATCGTTAGGCCACGCGGGTTCTCCATAATAATTATGACCCATCCCTTTAGCCAATTTCGCTCTTAATACAGGATCATTCAAGTCAGTTCAAGTCAC
ACACTCCCATAATCCATTATTTTTTCGGAGAGTTCCATTCAACTATTCGTGTATATCAAATAAAGAATGCAATTTATTTTGTTAAGTTGAAGGGAAATAT
CCAAATACATGTCTTATTTTTTTTTGTAATAATGCATATTTGTAGCAATGAAATACTATTCTCCTCCCCAAAATGATTGATTTGATTAATTTATGTTTTT
TTCTTTTTTTTTATTCTATAAAGGACCGGAAATGCCTTGCTTACGTA