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Detailed information on CNT30144939


BLAST search results

BLAST vs Swiss-Prot:
sp|P33629|TBA_PRUDU, E-value = 1e-68

BLAST vs NONCODE:
NONGMAT000219, E-value = 5e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640127Medicago truncatulaNymphaea colorata40.8624.9488.94199forward
CNT30517711Medicago truncatulaJuglans regia68.1762.6483.43332forward
CNT30702815Medicago truncatulaQuercus lobata30.640.4985.91149forward
CNT30371538Medicago truncatulaArabidopsis thaliana44.7645.8986.24218forward
CNT30618174Medicago truncatulaSesamum indicum26.0829.485.83127forward
CNT3021397Medicago truncatulaCitrullus lanatus23.8217.5284.48116forward
CNT30727923Medicago truncatulaCorchorus capsularis4618.9287.5224forward
CNT30379228Medicago truncatulaManihot esculenta44.762589.45218forward
CNT30504800Medicago truncatulaNicotiana attenuata45.1749.7786.82220forward
CNT30709049Medicago truncatulaGlycine max44.5631.3186.18217forward
CNT30284381Medicago truncatulaTriticum aestivum45.5929.0683.33222forward
CNT3086234Medicago truncatulaVigna radiata38.435.2887.7187forward
CNT30247087Medicago truncatulaAvena sativa45.5930.3384.23222forward
CNT3059767Medicago truncatulaArabidopsis lyrata44.7630.7587.61218forward
CNT30265526Medicago truncatulaBrassica rapa44.7621.9587.16218forward
CNT30445850Medicago truncatulaSaccharum spontaneum45.1724.1884.09220forward
CNT3041114Medicago truncatulaChlamydomonas reinhardtii20.7414.3783.17101forward
CNT30229012Medicago truncatulaAnanas comosus75.5644.3983.42368forward
CNT30204030Medicago truncatulaHelianthus annuus41.4848.6783.66202forward
CNT30624589Medicago truncatulaDaucus carota23.6123.1989.57115forward
CNT30361562Medicago truncatulaSorghum bicolor42.7121.0385.1208forward
CNT30358630Medicago truncatulaLactuca sativa33.8842.0988.48165forward
CNT30481833Medicago truncatulaChara braunii25.6742.3783.2125forward
CNT30430260Medicago truncatulaPapaver somniferum47.6439.8686.21232forward
CNT30571197Medicago truncatulaVitis vinifera45.7956.686.55223forward
CNT3024728Medicago truncatulaPopulus trichocarpa50.7230.4286.64247forward
CNT30582828Medicago truncatulaEchinochloa crusgalli47.6427.0483.62232forward
CNT30333509Medicago truncatulaCynara cardunculus32.4428.7381.65158forward
CNT30726259Medicago truncatulaLupinus angustifolius46.227.1488.89225forward

Expression of CNT30144939

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MKNKRSNPAKSNNLHLHQHHLHHQTQHQPPHNPSQEQRDLHEPLRTHLLPYPHQHTNAQKHA*

>peptide 2 (88 aa)
MHKSTLSIHKIKLMINPGKHLSNTGRVRDHAHGPLHLGKITTVHQTTSHVFSMARVTLSHHGRRFKSTVGDLSNRKLLMVSLLSRDNRC

>peptide 3 (50 aa)
MHTALCTLARSPRYIKQQAMYFPWRGSHLAIMEEGSKALLVISATESCSW*

Sequence

>CNT30144939
AAACAATTCAAAAACAAAACATAATTTTGTCCCAGAAATTAAAATGAGCACATGAAAAACAAGAGATCAAATCCTGCAAAATCTAATAATCTTCATCTCC
ATCAACATCATCTCCATCACCAGACTCAGCACCAACCTCCTCATAATCCTTCTCAAGAGCAGCGAGATCTTCACGAGCCTCTGAGAACTCACCTTCTTCC
ATACCCTCACCAACATACCAATGCACAAAAGCACGCTTAGCATACATAAGATCAAACTTATGATCAATCCTGGAAAACACCTCAGCAACACTGGTAGAGT
TAGAGATCATGCACACGGCCCTCTGCACCTTGGCAAGATCACCACGGTACATCAAACAACAAGCCATGTATTTTCCATGGCGAGGGTCACACTTAGCCAT
CATGGAAGAAGGTTCAAAAGCACTGTTGGTGATCTCAGCAACAGAAAGCTGCTCATGGTAAGCCTTCTCAGCAGAGATAACAGGTGC