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Detailed information on CNT30144937


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 6e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381249Medicago truncatulaManihot esculenta25.331.5384.76105forward
CNT30526763Medicago truncatulaPhaseolus vulgaris33.4926.1381.29139forward
CNT30202121Medicago truncatulaPisum sativum32.059.4984.96133forward
CNT30709978Medicago truncatulaGlycine max37.1120.5683.12154forward
CNT3044393Medicago truncatulaPrunus dulcis37.5917.9782.05156forward
CNT3090059Medicago truncatulaSolanum tuberosum23.3712.7885.5797forward
CNT3087148Medicago truncatulaVigna radiata36.3925.5182.78151forward
CNT30508399Medicago truncatulaSolanum lycopersicum23.3745.7583.5197forward
CNT30171855Medicago truncatulaTrifolium pratense36.3912.7785.43151forward
CNT30655496Medicago truncatulaRosa chinensis24.8235.7684.47103forward
CNT30620100Medicago truncatulaCajanus cajan24.5810.8286.27102forward

Expression of CNT30144937

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LKRDCFIGTIFLDHMLDHLRFTCHHLGNFEGFAVGTVESDLLGV*

Sequence

>CNT30144937
CCTGAAGAGGGATTGCTTCATTGGCACAATCTTCCTCGATCATATGCTTGATCACCTGCGATTCACGTGCCACCATCTTGGAAACTTTGAAGGTTTCGCC
GTCGGAACTGTTGAGAGTGATCTTCTTGGTGTATGAAGACATCGTGATCGTGTTTGGGGGAAAGATTATGGCTGGTCGTAGAGAACTGGCAATGGTAGAC
TCCTCATAATTGTGTGCTTTCTATAATAACTTTAACGATAAGTTCATGTCAAGATCATAGAAAGGGAATTGTAAGACCACCCATTGGATGACAGTAGCCA
AATTCCTCTTCAGCTTGGCTAAGCAATTCTTGAAATAAAGGCTCATTCAAGAATGATATTGGAATCAAGAACCTCTTCATTTTCTCTCCAACATACACTG
CAAGATAGCCTTTTG