Detailed information on CNT3014485


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690617Zea maysOryza sativa44.237.6690.2292forward
CNT30522968Zea maysSetaria italica47.67.3794.9599forward
CNT30293057Zea maysTriticum aestivum47.611.7788.8999forward
CNT30437732Zea maysAegilops tauschii40.3812.2388.184forward
CNT30249607Zea maysAvena sativa42.796.6387.6489forward
CNT30455685Zea maysSaccharum spontaneum47.66.894.9599forward
CNT30135479Zea maysLolium perenne47.67.1184.8599forward
CNT30364121Zea maysSorghum bicolor47.615.0595.9699forward
CNT3099938Zea maysOryza rufipogon44.238.6890.2292forward
CNT30580297Zea maysEchinochloa crusgalli47.67.2692.9399forward

Expression of CNT3014485

Peptides detected in this lncRNA

>peptide 1 (45 aa)
RPCPKEAGTRREARRRQPCLKEAGTRRSVEDGRSRWRPRRACTRG*

>peptide 2 (38 aa)
MGVAVGDLAELVREVEDSLGLAGGDLAHLVGDELGGDRA

Sequence

>CNT3014485
CGGCCTTGCCCGAAGGAGGCGGGTACGCGGCGGGAGGCGCGTAGGCGTCAGCCTTGCCTGAAGGAGGCGGGTACGCGGCGGTCGGTGGAGGATGGGCGTA
GCCGTTGGCGACCTCGCCGAGCTTGTACGAGAGGTTGAGGACTCCCTGGGGCTTGCCGGAGGAGATCTTGCGCACCTGGTAGGCGACGAACTTGGCGGGG
ACAGGGCC