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Detailed information on CNT30144801


BLAST search results

BLAST vs Swiss-Prot:
sp|O82709|CALX_PEA, E-value = 1e-88

BLAST vs NONCODE:
NONGMAT001818, E-value = 1e-102

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30686114Medicago truncatulaTriticum urartu29.0728.0982.74168forward
CNT30149228Medicago truncatulaBrachypodium distachyon27.1633.0582.8157forward
CNT30116414Medicago truncatulaOryza nivara22.1545.7185.94128forward
CNT3048947Medicago truncatulaCucumis sativus47.7519.5180.07276forward

Expression of CNT30144801

Peptides detected in this lncRNA

>peptide 1 (65 aa)
GFLFVGLFHSPQPGAVSHFGFSILGASHSPSSSSSQSSGFVASGSSISSGSSSSHPSGFRMAVYT*

>peptide 2 (33 aa)
MTGSSSSLTMAYFLAGSLTRSPKSSCPSLLECFQ

>peptide 3 (59 aa)
WVPLRWPLPLTTTRGCFTLWVFNFGSFPFTILLIIPIFRFCCLRVIYFLWLVVQPSFRL*

>peptide 4 (65 aa)
MVFNILSGLWILMPEDEVNLICCPTLVWTKHDRIWRFVVKSLGFPTTLLGLKIFDICTTTFKAIL*

>peptide 5 (78 aa)
LGSSSLASSTHHNQGLFHTLGFQFWELPIHHPPHHPNLQVLLPPGHLFPLARRPAILQALEWQCTHEIVCQMGQKGGT*

Sequence

>CNT30144801
CTGGGTTCCTCTTCGTTGGCCTCTTCCACTCACCACAACCAGGGGCTGTTTCACACTTTGGGTTTTCAATTTTGGGAGCTTCCCATTCACCATCCTCCTC
ATCATCCCAATCTTCAGGTTTTGTTGCCTCCGGGTCATCTATTTCCTCTGGCTCGTCGTCCAGCCATCCTTCAGGCTTTAGAATGGCAGTGTACACATGA
GATAGTTTGTCAGATGGGACAGAAGGGGGGAACTTGAGATGGTGTTCAACATACTTTCCGGTCTTTGGATTCTTATGCCTGAAGATGAAGTGAACCTTAT
TTGTTGCCCCACACTTGTCTGGACCAAACATGACAGAATATGGAGATTCGTTGTCAAATCCCTTGGGTTTCCAACCACTCTCCTGGGGTTGAAGATATTT
GATATATGCACCACCACATTCAAGGCCATTCTGTAGGCGAGTCTCAAACTGAAGAACAACTGATCCATCCTTAAGAATGACAGGTTCGTCAAGTTCTTTA
ACTATGGCGTACTTCCTTGCTGGTTCACTAACAAGAAGTCCAAAATCGTCGTGCCCCTCACTCTTAGAATGCTTCCAG