Detailed information on CNT30144767


BLAST search results

BLAST vs Swiss-Prot:
sp|P36494|CB4_SPIOL, E-value = 3e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30403088Medicago truncatulaBeta vulgaris13.3820.5185.3989forward
CNT30526506Medicago truncatulaPhaseolus vulgaris20.7511.6583.33138forward
CNT30710447Medicago truncatulaGlycine max21.227.4386.52141forward
CNT30360807Medicago truncatulaLactuca sativa16.0924.8882.24107forward
CNT30120689Medicago truncatulaCitrus clementina20.7512.1384.78138forward
CNT30725792Medicago truncatulaLupinus angustifolius48.7212.7586.11324forward

Expression of CNT30144767

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSLVEGSNETNRSFSCNSSLNCKDEENHHGQTRMLNLCQLKSFFLFRITGQTKRIKELSTWV*

>peptide 2 (37 aa)
MFVEQKNIYTVSCCYKQHYIEACNRVQTYINGIHSSF*

Sequence

>CNT30144767
CTCTCCTAAGGATAAAATTGTAAAAATAATAGTGATATAAAAACAACTTTATTACCCATTTTCTTAATTTCCGTAGTTTTAGCAAAAGAGTCTTATAATT
GACGGAGGTAGAAAGTAGCGAGATAAATATAAATGTTTGTAGAACAGAAAAACATATATACCGTAAGTTGTTGCTATAAGCAGCATTACATAGAAGCATG
CAACAGAGTACAAACATACATAAATGGTATACATAGCAGTTTTTAACTTCTGCAGAAGAAAAATAAATTAACTAAATTTAAAGATGGAGTAATTAGTGAC
ACATAGTATTGAAGATTGAGATAAAAGGGCTTCACATGTTATGTCACTGGTTGAAGGTAGCAATGAAACCAATAGGTCCTTTTCCTGTAACAGCAGCTTG
AATTGCAAAGATGAGGAAAACCACCATGGCCAAACGAGAATGCTTAATCTCTGCCAATTGAAGTCTTTCTTTCTCTTCAGGATCACTGGCCAAACCAAGA
GGATCAAAGAACTTTCCACCTGGGTATAACCTTTTCTCTGGGTCAAGCTCTGCATTCCTTTGAAACTCAATGTAGCCAATTACTAATACTTCAATCCATA
TCAATGTGCTAATTGAGAATGGAAGAGAAAATCCAAAGTAGGATGATCCTTCCACCAGCTCTACC