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Detailed information on CNT30144643


BLAST search results

BLAST vs Swiss-Prot:
sp|P14856|LOX2_PEA, E-value = 4e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709697Medicago truncatulaGlycine max47.846.8680.75239forward
CNT3087387Medicago truncatulaVigna radiata42.412.980.19212forward

Expression of CNT30144643

Peptides detected in this lncRNA

>peptide 1 (53 aa)
SVGHLNRASSVKQIWFFVSAFNFFLDVFHLLCKPFEGYSCLFICCPFIILSFP*

>peptide 2 (29 aa)
MSSIFFANLLKATLAFSSAVHSSFSLFPK*

Sequence

>CNT30144643
AAAGTGTAGGGCATCTTAACCGGGCCAGTTCGGTTAAGCAAATCTGGTTCTTTGTTTCTGCTTTCAATTTTTTTCTCGATGTCTTCCATCTTCTTTGCAA
ACCTTTTGAAGGCTACTCTTGCCTTTTCATCTGCTGTCCATTCATCATTCTCTCTTTTCCCTAAGTAAACTTCATCAGAAGCATGCCTTGACAATATCTC
TATCACCGTAAGGTCAATGAGAGCCTCGGTCTTTGGTGTGATTGTTCTCAAATAAGCCCTTTGGTCATCTTTCTCCATCTCTTCATATTCTTTGGTTCCC
TTTTCAGGAATTAACCTCCTTGTCATAGTTGGTCGGTTCAAGATTAAACCACCGTAAGGATATTGTCCGAAATTGACAGCTGCGTGGAAAGCGGATGCAA
GCCATATGATTATTGAGCAGGATTCCACCAACTCGTTAATCGAATTCATCTCAGGCCACCAAGGCTTATTTTTATGATCACCATGACCGATCTCTACGAC