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Detailed information on CNT30144554


BLAST search results

BLAST vs Swiss-Prot:
sp|O82709|CALX_PEA, E-value = 3e-174

BLAST vs NONCODE:
NONGMAT001818, E-value = 4e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676354Medicago truncatulaSetaria viridis25.1242.6682.33215forward
CNT30517641Medicago truncatulaJuglans regia34.5855.0284.8296forward
CNT30378008Medicago truncatulaArabidopsis thaliana42.1739.8580.06361forward
CNT30709122Medicago truncatulaGlycine max34.8184.6687.92298forward
CNT3043981Medicago truncatulaPrunus dulcis11.2127.2785.4296forward
CNT30190468Medicago truncatulaSecale cereale41.5936.8180.9356forward
CNT30397803Medicago truncatulaTriticum turgidum42.8746.7580.11367forward
CNT30238817Medicago truncatulaBrassica oleracea39.4963.4179.88338forward
CNT30264134Medicago truncatulaBrassica rapa37.6237.1479.81322forward
CNT30140632Medicago truncatulaLolium perenne14.661.2782.4125forward
CNT30126269Medicago truncatulaCorymbia citriodora20.7946.9780.9178forward
CNT30686469Medicago truncatulaTriticum urartu14.622.1284125forward
CNT30349705Medicago truncatulaEragrostis tef36.4544.5179.49312forward
CNT30365925Medicago truncatulaSorghum bicolor37.7336.3781.73323forward
CNT3038556Medicago truncatulaCucumis melo48.8352.9179.9418forward
CNT30101562Medicago truncatulaOryza rufipogon39.1438.7782.99335forward
CNT30585446Medicago truncatulaEchinochloa crusgalli14.9542.3884.38128forward
CNT30333676Medicago truncatulaCynara cardunculus27.6945.9381.86237forward
CNT30725707Medicago truncatulaLupinus angustifolius62.9797.8288.68539forward

Expression of CNT30144554

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MGASSSQSSGFTASGSGILALSSQSSGLLSSGSGIVLEGIREGSKSSSDRKLAFFFSSPSTRILNSLSGFRMAVYT*

>peptide 2 (51 aa)
MVFNILSGLWILMPEDEVNLICCPTLVWTKHDRIWRFVVKSLGFPTTLLGLK

>peptide 3 (39 aa)
CCLLFSLLLLFLNVKLGFPCSFTIGFCNLIILSYKNIIK*

>peptide 4 (32 aa)
MPSCIVQISIPIAAIGSKSGFSSSKYSGFGIS*

Sequence

>CNT30144554
CTGCTGCCTCCTCTTCAGCCTTCTGCTTCTCTTTCTCAATGTTAAACTTGGGTTTCCATGTAGTTTCACGATAGGATTCTGCAATCTTATCATCCTTAGC
TATAAGAACATTATCAAATAGAATGCCGTCCTGCATTGTCCAAATTTCAATACCAATAGCAGCAATAGGCTCAAAGTCAGGTTTCTCAAGTTCAAAGTAC
TCTGGGTTTGGAATCTCCTGAGGCTTCCATATACCCTTATAAGCTGGGTTATCAATGAAGGGGGCACTCCATTTTCCCTTATAAGCTGGGTTCCTCTTCG
TTGGCCTCTTCCACTCACCACAACCAGGGGCTGTTTCACACTTTGGGTTTTCAATTTTGGGAGCTTCCCATTCACCATCCTCCTCATCATCCCAATCTTC
AGGTTTCTCAGCTTCTTCATCGATAATTTCCATGGGTGCATCCTCATCCCAGTCCTCTGGCTTTACAGCTTCTGGGTCAGGAATCTTGGCTCTCTCGTCC
CAGTCTTCGGGTTTGTTATCATCAGGATCAGGGATTGTCTTGGAAGGGATAAGAGAAGGCTCAAAATCCTCCTCGGATAGGAAGTTAGCCTTTTTCTTCT
CCTCGCCGTCAACTAGAATTCTCAACTCATTATCAGGCTTTAGAATGGCAGTGTACACATGAGATAGTTTGTCAGATGGGACAGAAGGGGGGAACTTGAG
ATGGTGTTCAACATACTTTCCGGTCTTTGGATTCTTATGCCTGAAGATGAAGTGAACCTTATTTGTTGCCCCACACTTGTCTGGACCAAACATGACAGAA
TATGGAGATTCGTTGTCAAATCCCTTGGGTTTCCAACCACTCTCCTGGGGTTGAAG