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Detailed information on CNT30144505


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30485914Medicago truncatulaOlea europaea23.1818.7381.33150forward
CNT30261767Medicago truncatulaBrassica rapa12.9831.4684.5284forward
CNT3023899Medicago truncatulaPopulus trichocarpa32.4632.2679.05210forward

Expression of CNT30144505

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MFVEQKNIYTVSCCYKQHYIEACNRVQTYINGIHSSF*

>peptide 2 (47 aa)
MNNLTLTKPLNPKNLRVRLKRCRVNICTLNPSPNNITCKVLSQVLVK*

Sequence

>CNT30144505
CTCTCCTAAGGATAAAATTGTAAAAATAATAGTGATATAAAAACAACTTTATTACCCATTTTCTTAATTTCCGTAGTTTTAGCAAAAGAGTCTTATAATT
GACGGAGGTAGTAAGTAGCGAGATAAATGTTTGTAGAACAGAAAAACATATATACCGTAAGTTGTTGCTATAAGCAGCATTACATAGAAGCATGCAACAG
AGTACAAACATACATAAATGGTATACATAGCAGTTTTTAACTTCTGCAGAAGAAAAATAAATTAACTAAATTTAAAGATGGAGTAATTAGTGACACATAG
TATTGAAGATTGAGATAAAAGGGCTTCACATGTTATGTCACTGGTTGAAGCTTCAACAGCCAAAGCACCAAGAGCACCAAGCATAGCCCATCTTCCATGA
ATAACCTCACACTCACGAAACCTCTGAATCCCAAAAACCTCCGTGTAAGGCTGAAACGGTGTAGGGTTAACATCTGTACTCTCAACCCTAGTCCCAATAA
TATCACCTGCAAGGTTCTTAGCCAAGTTCTGGTCAAGTGAGTCAAGATCAAACTGCAGATACTCAACAGGTTTGGCTAATCCCAATGGATCAAAACCACG
GTCACCGATCATCGTCCCATCGAGCCATTCCGGGTACAAACCCTAGT