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Detailed information on CNT30144288


BLAST search results

BLAST vs Swiss-Prot:
sp|P93400|PLDA1_TOBAC, E-value = 2e-120

BLAST vs NONCODE:
NONPOPT000031, E-value = 1e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3046495Medicago truncatulaPrunus dulcis30.3232.4380.92262forward
CNT30292308Medicago truncatulaTriticum aestivum8.831.1584.2176forward
CNT30228403Medicago truncatulaAnanas comosus11.5726.1882100forward
CNT3035661Medicago truncatulaCucumis melo18.9823.2381.71164forward

Expression of CNT30144288

Peptides detected in this lncRNA

>peptide 1 (75 aa)
EGGQGDHETPGLLSSHIIRIRFWSFRRLVLSLFYHLSIAKAEECQIVPRIFLKSLGIECFNNIFVHHIHCSPLPV*

>peptide 2 (35 aa)
MVPISIFWTMLPPSSGLRGHKTQCTSEPRKNSSVS*

Sequence

>CNT30144288
AGAAGGTGGCCAGGGAGATCATGAAACGCCTGGCCTCTTGAGCTCGCATATAATCCGAATCAGGTTCTGGTCTTTCAGGAGGCTCGTACTCTCCTTGTTT
TACCACCTCTCGATTGCCAAGGCAGAAGAATGTCAAATAGTCCCGAGGATTTTCCTCAAGTCCCTTGGCATTGAGTGCTTCAATAATATCTTTGTACATC
ATATCCATTGTTCTCCTCTGCCAGTCTAATATTGCCTGAACTGATGAACTTTCTGGGACACCCTCAGGAAAGTTAGGCTGATGAAAATCATCATGATGTG
CTGTGTCCAGAGTTCGGAAAAGTGAATGAAACGGAGTATCATATCTTCCATCACAGAGATCAATGCCTCCTACAAAACTCACAATTCTTCGTTTATTTAA
TCCCACTTCATTTGGCAACTCACTGTCCACCACCAAAATTTTCTGATGATGAGTAAACATGGTGCCAATTTCTATATTCTGGACAATGCTTCCACCATCA
TCCGGATTGCGAGGGCATAAGACACAGTGCACTTCAGAGCCTCGGAAGAATTCCTCAGTTTCTTGATCATGAGTAGCCATCAACCCATCTTTTTTTAACA
GAGGAACCGACGTTCTATCATCCCAAACAAGCATTAATACCCTAACACCTTCTTGTGCTTTTTTCTTGAGAAGCTCACCAAGTGTGATGTCTCCTCCTGG
CTTTGGCCTCCTTGAATCCCTTACCAAGGAAATCTCGGTATAAACAGACCACCCTGTAATGTATATTAAGTGCCTTGCTTTTGTGATTGCATCAAAAACA
TCCTCCCAACATCTATGAGGCTGGTAAGTCTGACCTCCTGCAAGTTGTATATTGGGGACAAAAT