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Detailed information on CNT30144286


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMTRT000465, E-value = 6e-141

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695362Medicago truncatulaOryza sativa17.1822.3496.7261forward
CNT30547713Medicago truncatulaIpomoea triloba20.568.5194.5273reverse complement
CNT30518318Medicago truncatulaJuglans regia20.5611.5794.5273reverse complement
CNT30500546Medicago truncatulaCoffea canephora2015.3395.7771reverse complement
CNT30404042Medicago truncatulaBeta vulgaris20.5615.2195.8973reverse complement
CNT30194705Medicago truncatulaPisum sativum20.8513.4198.6574reverse complement
CNT30191267Medicago truncatulaSecale cereale19.4420.2995.6569reverse complement
CNT30172851Medicago truncatulaTrifolium pratense56.6233.4489.55201reverse complement
CNT30467175Medicago truncatulaSaccharum spontaneum16.925.6496.6760reverse complement
CNT3067939Medicago truncatulaLeersia perrieri18.8723.2697.0167forward
CNT30207452Medicago truncatulaHelianthus annuus17.4622.2295.1662reverse complement
CNT3032717Medicago truncatulaTheobroma cacao20.858.4794.5974reverse complement
CNT30115398Medicago truncatulaEutrema salsugineum20.8515.194.5974reverse complement

Expression of CNT30144286

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MLQNTQNQLSWNNTAKLCLERSFPSQPNLKIIKPEQYMHQYYKTLKINCLGTTQLNYV*

>peptide 2 (40 aa)
MYHEAGIKQDGKLFSCICSYLDLCLIFRRFLFNLLMRFFFH

Sequence

>CNT30144286
ATGCTGCAGAACACTCAAAATCAATTGTCTTGGAACAACACAGCTAAACTATGTCTAGAGAGAAGCTTCCCCTCCCAACCAAACCTCAAGATCATTAAAC
CAGAACAGTACATGCACCAATACTACAAAACACTCAAAATCAATTGTCTTGGAACAACACAGCTAAACTATGTCTAGAGAGAAGCTTCCCCTCCCAACCA
AACCTCAAGATAATTAAACCAGAACAGGCCAATGTATCATGAAGCAGGCATAAAGCAAGATGGAAAGCTCTTCTCCTGCATATGCTCCTACTTAGATCTC
TGTCTCATCTTTCGGCGCTTCCTCTTCAACCTCCTCATGCGCTTCTTCTTCCACT