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Detailed information on CNT30144077


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 1e-95

BLAST vs NONCODE:
NONTPRT001389, E-value = 4e-168

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30173795Medicago truncatulaTrifolium pratense21.7128.4490.32155forward

Expression of CNT30144077

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MKRTLFLDIIIRKSSSIFQLLPCKDQSLLIRWNSFFVLDFGFDVVDCVG*

>peptide 2 (53 aa)
MKRRLFLNIIISESPPILKLFSSKDQSLLIRWNALLILNLGLHVINSIRTLHL*

Sequence

>CNT30144077
TATCAAATTGAAACTTTTATTAATGAACTTTTAATCATTGCAACAGAACACAAATCGAAAAAACAACACAGAAACTAGAAAAAACTAGAAACTTATGGAT
TTAAATCTAAACATCGTCACCACCACCACCACGTAGCCTGAGAACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCAGCGAGAGTCCTCCCATCC
TCAAGTTGTTTTCCAGCAAAGATCAATCGCTGCTGATCCGGTGGAATGCCCTCCTTATCCTGAATCTTGGCCTTCACGTTATCAATAGTATCAGAACTCT
CCACCTCTAGAGTAATTGTCTTCCCGGTCAACGTCTTCACAAATATCTGCATCCCACCGCGCAACCTCAGAACTAGATGAAGCGTACTCTCTTTCTGGAT
ATTATAATCCGCAAGAGTTCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAATCGTTGCTGATCCGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCT
TTGACGTTGTCGATTGTGTCGGATGATTCTACCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCATGATGATATAAGAAAGAAGAA
GAGAGTGATTGGTTTTGAGGAATTGAGAGAAAGAATTGAGAACTGAGAAGATTGATGATGAAAGAGATAGGAAAGGTTGTTGATTTATAAGGAGATGAAA
GAAGAATCCAGAAC