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Detailed information on CNT30143877


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU35|ERLL1_ARATH, E-value = 5e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631005Medicago truncatulaVigna unguiculata32.0427.5883.52182forward
CNT30201619Medicago truncatulaPisum sativum50.1834.2191.93285forward
CNT30171111Medicago truncatulaTrifolium pratense49.1233.0292.47279forward

Expression of CNT30143877

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MKVYEHWKPEGTDFSQALSRRLSVIGTFKLIPRTLALIAVQRQIAASKSTKP*

Sequence

>CNT30143877
TCAAAACAATAGTGAAATAACCTTATTACGATAGTAACATAAGTATTAGTATGGTTTGAACCTTTGACATGAAAGTCTATGAACATTGGAAACCTGAAGG
AACAGATTTTTCACAAGCACTAAGTAGGAGACTGAGTGTGATAGGAACATTCAAGTTGATACCAAGAACATTAGCCTTAATAGCAGTACAAAGGCAAATT
GCTGCATCTAAATCAACCAAACCTTGAAGCAATGCACAACACTTGCTTGAAGCAGGACTTCCAACAATAACATTAACAAGTCCTAAAACATCAGCACAAA
CACCTAGCTTTAATGTGTCACTAGGACATTTTTGTGATGTTGAAGGAGTAGGAGGTGTTGTTGAAGGTGGTGGAGGACTAGGCTTTGGCTTTGGCTTAGG
CTTAGGTGATGGAGTTGGTTTGCATGAACCACAAGCATGTGAAAATGTTGAATAAGCAAGGAGAGAAAACAATATAATTAGGGCACTAAGCTTGTTGGAA
GCCATTGTTAAGAAATGTACGCTAATGCTTTTGTGTGTTTTGATGTTGAATCATAGGATGTGAAAGAA