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Detailed information on CNT30143824


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379170Medicago truncatulaManihot esculenta45.3645.2182.48137forward
CNT30172294Medicago truncatulaTrifolium pratense68.5474.1985.99207forward
CNT30478989Medicago truncatulaArabidopsis halleri20.8620.5987.363forward
CNT30724620Medicago truncatulaLupinus angustifolius38.0837.787.83115forward

Expression of CNT30143824

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LSWVAPTCDPSGSTKVMERGYGLFGWSVSCNMLACPLQVESCATGHG*

Sequence

>CNT30143824
GCTGAGTTGGGTAGCGCCAACTTGTGACCCAAGTGGGAGCACCAAAGTGATGGAACGTGGCTACGGCTTGTTTGGCTGGTCTGTTAGCTGCAATATGCTG
GCCTGCCCGCTCCAAGTTGAGAGTTGTGCCACGGGACATGGGTGAAGGTCTATGTCTCTTGGTCCCTAGACGAGGGGGAATTGCGTGAGGCTGGTTTCAC
AGAGCAGCGAATACCTCTGGCTCCCAACAGTGGAGGGACTACAGGCTGCTGCACTTCCAGTCCACTAAGCCCGGTGAGCCTAGCCTTTGAACCATCACTT
TT