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Detailed information on CNT30143307


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 7e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-88

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397375Lolium perenneTriticum turgidum64.6727.3692.65476forward
CNT30667756Lolium perenneTriticum dicoccoides62.9167.9992.44463forward

Expression of CNT30143307

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICICRE*

>peptide 2 (50 aa)
WISEGRNDHSQTKTINKIDSKMTDYSKVPLFITTNCCTSKLLSRNQHIGS*

>peptide 3 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVNVLTKICMPPRRRRTR*

Sequence

>CNT30143307
TATGGATTTCAGAAGGCAGAAACGACCATTCACAAACTAAAACAATAAATAAAATCGACAGTAAAATGACAGATTACTCCAAAGTTCCTTTATTCATTAC
CACGAACTGCTGTACCAGCAAACTGTTATCACGAAACCAACACATAGGGAGCTGATGGTCCATTAAACCAGGCACAATAGACTTGACACAAACGAGAGTA
CGGGACAGACACTTCACTTGTAGGGCTACAAGGACAGCCCACCGGACAACACGAGACACTTACTGACCACCGCGAAGGCGGAGCACCAGGTGGAGGGTGG
ACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCATCCTCTAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC
CTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAGGACTCCACCTCCAGGGTGATAGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCATGCCACCC
CGAAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCAAAGATAAGGCGCT
GCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTAACATTGTCGATGGTATCTGAGGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAG
GGTCTTCACAAAGATCTGCATCTGCAGAGAATAATA