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Detailed information on CNT30143305


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191038Lolium perenneSecale cereale69.8252.3193.12465forward
CNT30301530Lolium perenneTriticum aestivum69.9726.3693.99466forward
CNT30667831Lolium perenneTriticum dicoccoides69.5260.4492.44463forward
CNT30107357Lolium perenneOryza longistaminata69.3761.8594.59462forward

Expression of CNT30143305

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LITGNFEVHLFIFERDCCTSNCSSRNQHK*

>peptide 2 (61 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICIPPRRRRTRWRVDSFWML*

>peptide 3 (44 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVKVFTKICIC

Sequence

>CNT30143305
AATTGATCACAGGAAACTTCGAAGTTCATTTATTCATATTTGAACGGGACTGCTGTACCAGCAACTGTTCTTCACGAAACCAACACAAATAGGGGACTCG
ACGGTCCATTAAACCAGACACAGTACTTCAAACGAGACAGACACAATTTCAAGGGCGACAACAAGGCAGCCCACCAGAAGCAGCTCCAACACCAAGACAC
TTACTGACCACCGCGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCG
AAGATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGG
TCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATACCACCACGTAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT
CCTGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTG
TCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCATCTGC