Detailed information on CNT30143168


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000308, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30177693Lolium perenneSecale cereale83.05100.296.531989reverse complement
CNT30284697Lolium perenneTriticum aestivum82.84100.296.981984reverse complement
CNT30226054Lolium perenneHordeum vulgare77.3794.2596.111853reverse complement
CNT30400777Lolium perenneTriticum turgidum86.163.6496.752062forward
CNT30595147Lolium perenneEragrostis curvula72.1952.7398.731729forward

Expression of CNT30143168

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEPSLRS*

>peptide 2 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIGAYHGGDG*

>peptide 3 (33 aa)
MPTRDRRMLLIGLRRHLMRNQSLWVPGGVWSQG*

>peptide 4 (33 aa)
MWLLIPQGAVGQRSGCRPIVPDTARGRSGGTTR*

>peptide 5 (56 aa)
MPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGSRRRGRFAAPDVARSPLNLII*

>peptide 6 (48 aa)
MKNVAKCDTWCELQNPANHRVFERKLRPRPLGRGHACLGVTPNTLPPN*

>peptide 7 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

Sequence

>CNT30143168
AATTTGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACG
TGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCTGCCCGCTGATCCGATGATTCATGATAACTCGACGGATC
GCAAGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAA
TTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCGGGCGCGCAAATTACCCAATCCCGACACGGGGAGGTAGTG
ACAATAAATAACAATACCGGGCGCATTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCA
GCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGCCGGGTCGGCCGGTCCGCCTCACG
GCGAGCACCGACCAACTCGACCCTTCAGCCGGCGATGCGCTCCTAGCCTTAATTGGCCGGGTCGTGCCACCGGCATCGTTACTTTGAAGAAATTAGAGTG
CTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAG
GGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTA
ATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGAC
TCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGC
GTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCGGACATAGCAAGGATTGACGGACTGAGAGCTCTTTCTTGATTCTATGGGT
GGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGCCATCCC
TCCGCAGCTAGCTTCTTAGAGGGACTATCGCCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG
CGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGAGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTG
GTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATG
GTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCG
TAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAACAGACCGCGCACGAGTTATCTAGCCCGCTGGGCGGCGGCATC
GTCCGTCGCTTGGCAAAAGTCCTCGACAACCTCATCTTTTCGGAGTTGGGGCTCGGGGTAAAAGAACCCACGGCGCCGAAGGCGTCAAGGAACACTGTGC
CTAACGAGGGGATGTGGCTGGCTTGCTAGCCGCACCCCGAGTTGCAATTCTATATAATCCACACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGA
TGAAGAACGTAGCGAAATGCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAGGCCTCTTGGCCGAGG
GCACGCCTGCCTGGGCGTCACGCCAAACACGCTCCCACCCAACTAACTTGGTGTGGGACGCGGCATGTGGCTCCTCATCCCGCAAGGGGCGGTGGGCCAA
AGATCCGGCTGCCGGCCTATCGTGCCGGACACAGCGCGTGGTAGGTCAGGCGGGACTACCCGCTGAATTTAAGCATATAAATAAGCGGAGGAGAAGAAAC
TTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCTTGAGAATCGATCGGCTTTGCCGTTCGAATTGTAGTCTGGAGAGGCG