Detailed information on CNT30142664


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30460329Lolium perenneSaccharum spontaneum48.8740.1689.4151forward
CNT308524Lolium perenneZea mays39.8116.1686.99123forward
CNT30100102Lolium perenneOryza rufipogon37.8635.7894.02117forward
CNT30115941Lolium perenneOryza nivara46.2826.6391.61143forward

Expression of CNT30142664

Peptides detected in this lncRNA

>peptide 1 (33 aa)
GAVRWRSSRAVRKMGQTKSAWMKTLTGLLWYAP*

>peptide 2 (64 aa)
GGEVEEQQGREEDGPDEERVDEDVDRVAVVRAVEGEVPLQVEDAASAAAALSHRRRAAAWGLLR*

Sequence

>CNT30142664
GGGGCGGTGAGGTGGAGGAGCAGCAGGGCCGTGAGGAAGATGGGCCAGACGAAGAGCGCGTGGATGAAGACGTTGACCGGGTTGCTGTGGTACGCGCCGT
AGAAGGCGAAGTGCCGCTCCAGGTCGAGGACGCCGCCTCCGCCGCCGCCGCTTTGAGCCATCGTCGCCGGGCTGCTGCTTGGGGTTTGCTTCGGTGAAGG
CGAGGTGGATTTGTCAGGTGTTGCGCAGGGGGATGTCTGACGCGGCCGTCCTTTTCTTTTCAGGCCGCCTGTTCTGTGCAAGTGGGGCATTCGGTTAGAC
TGAACCGGT