Detailed information on CNT3014214


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 5e-37

BLAST vs NONCODE:
NONZMAT003983, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689963Zea maysOryza sativa24.195.3689.29112forward
CNT30109318Zea maysOryza longistaminata15.1227.039070forward
CNT30580009Zea maysEchinochloa crusgalli24.198.4784.82112forward
CNT30594890Zea maysEragrostis curvula33.9114.3585.35157forward

Expression of CNT3014214

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MPSTPASSISMTSLIVGRSCGFIWMHQSPMIHSFFFNSCISTPSLISPTSPWLSWLYTKDG*

>peptide 2 (62 aa)
LVLFYCIQFRYCRVRTVTLVITKEWPWRHLDAIDTSFKHLYDLAHRWSILRLHLDAPKSNDT*

Sequence

>CNT3014214
CTAGTACTCTTCTATTGTATACAGTTCAGATATTGTAGAGTAAGAACTGTCACCCTCGTCATCACAAAAGAATGGCCTTGGAGGCATTTGGATGCCATCG
ACACCAGCTTCAAGCATCTCTATGACCTCGCTCATCGTTGGTCGATCTTGCGGCTTCATCTGGATGCACCAAAGTCCAATGATACATAGTTTCTTCTTTA
ACTCGTGCATATCAACACCTTCACTGATCTCGCCCACATCTCCTTGGCTTAGCTGGTTGTACACCAAGGATGGGTAGTATGCTTGACTAGAGCTTCCTGC
ATGAGGATCTGCGTTCCTTCGCCCGCCCGTCATCTCCAACAGTAGCATTCCAAAGCTATACACATCAGATTTGCTAGAGATGACACCAAAGCTTCGAGAT
ACCATCTCTGGAGCTATATAGCCTATCGTTCCCCGCATAGCGCTCAGTGGCACGAAACTGTCG