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Detailed information on CNT30142111


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-169

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528977Lolium perenneEucalyptus grandis74.1168.3688.32916forward
CNT30461176Lolium perenneSaccharum spontaneum74.627.0589.48922forward
CNT307928Lolium perenneZea mays74.677.3589.7922forward
CNT30689817Lolium perenneTriticum urartu74.656.2993.82922forward
CNT30368741Lolium perenneSorghum bicolor74.2778.688.02918forward
CNT30174646Lolium perenneVigna angularis70.7183.8886.96874forward

Expression of CNT30142111

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSNV

>peptide 2 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 4 (35 aa)
MVRHLLTTTEAEHQTPETHTEGARLSTPVRKAVPY*

>peptide 5 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30142111
GTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAAC
AGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCA
CCACGGAGGCGGAGCACCAGACACCAGAGACACACACCGAAGGAGCCAGACTTTCAACCCCAGTGAGAAAAGCAGTGCCTTACTGACCACCACGGAGGCG
GAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCC
GGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA
CAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTT
GCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCAAGG
GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCACCGCGGAGGCGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG
CGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTC
GATGGTGTCCGAGGACTCCACCTCTAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGGAGCCTCAGCACCAGGTGGAGG
GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCT
TGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTG
TAAATACGAAGTAGACCAGAGTTACAGCAATGTAAA