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Detailed information on CNT30142093


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672296Lolium perenneSetaria viridis72.3885.2292.34692forward
CNT30191836Lolium perenneSecale cereale70.0867.6193.43670forward
CNT30398794Lolium perenneTriticum turgidum57.8568.1991.86553forward
CNT30242486Lolium perenneAvena sativa73.1267.894.13699forward
CNT30669573Lolium perenneTriticum dicoccoides72.4970.6492.78693forward
CNT30576634Lolium perenneOryza barthii72.5964.6891.5694forward
CNT30593848Lolium perenneEragrostis curvula72.2877.4792.19691forward

Expression of CNT30142093

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVLTKICI

>peptide 2 (66 aa)
SRSRTHQQRDMQTQQNLKLSSGFTYSFITVQFIATAPRQMFVDKYDITLDNKTAGKEDNRPLDQNN*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 4 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

Sequence

>CNT30142093
AGTAGATCAAGAACACATCAGCAACGGGATATGCAGACACAACAGAATTTGAAACTAAGTTCAGGGTTCACTTATTCATTCATCACGGTTCAATTCATAG
CTACTGCACCACGGCAGATGTTTGTAGACAAATATGATATCACACTAGACAACAAAACGGCAGGAAAAGAAGATAATCGACCACTCGACCAGAACAACTG
ACATCCCCAGTGGAGGACACCGAAGACCCCACAGTTGAGAACCCTCAGAGATTGAATCAGCTCCTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAG
GGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCC
TTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATAC
CACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAG
GCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCA
GTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGTGTGCGGCCGT
CCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCCGAGGA
CTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCT