Detailed information on CNT30141987


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Lolium perenneNymphaea colorata76.1357.3484.371145forward
CNT30191758Lolium perenneSecale cereale73.0772.1692.361099forward
CNT30226205Lolium perenneHordeum vulgare65.0394.7790.9978forward
CNT30704857Lolium perennePrunus avium75.9372.3285.91142forward

Expression of CNT30141987

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVRHLLTTTEAEHQVQGGLLLDVVVRQGATVLQLLTSEDQTLLVRRNALLVLDLRLHVVDGV*

>peptide 2 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWIL*

>peptide 3 (52 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTR*

>peptide 4 (29 aa)
NKYFSIIISQINIGVQKEPPKGDNTGNRI*

>peptide 5 (40 aa)
MVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 6 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 7 (51 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQS

Sequence

>CNT30141987
AAAACAAATACTTCTCAATAATAATATCACAAATCAATATAGGAGTACAAAAAGAACCACCGAAAGGAGATAATACTGGAAATAGAATTTAGACACATAG
CAGCATAACAGATATGCATACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGT
TTGTAGACACAAGGTGACATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCC
AGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAG
GGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATG
GTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGAGGGTGG
ACTCCTTCTGGATATTGTAGTCCGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC
CTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATGCCACCG
CGGAGGCGTAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCT
GCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCTAGGGTGATGGTCTTGCCGGTGAG
GGTCTTGACAAAGATCTGCATGCCACCACGGAGCCTCAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCC
AGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATGGTGTCTGACGACTCCA
CCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTT
GTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG
ACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACCAGA
GTTA