Detailed information on CNT30141933


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 6e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-81

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30309167Lolium perenneTriticum aestivum66.9929.3894.2483forward
CNT30441445Lolium perenneAegilops tauschii66.9964.9293.79483forward
CNT30722589Lolium perenneTriticum spelta66.9965.4593.79483forward
CNT30576670Lolium perenneOryza barthii70.8761.0591.98511forward

Expression of CNT30141933

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 2 (62 aa)
MVRHLLATAEAEHQVEGRLLLDVVVRQGAAILQLLTSEDETLLVRGDALLVLDLGLHVVDGV*

>peptide 3 (47 aa)
MRRCWSGGIPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYK

>peptide 4 (55 aa)
TNRILTQSLGLTYYYHKHSSSKAAAQQQKFVDTRCHNTSRPQYDGNTQPDNTKTH*

Sequence

>CNT30141933
ACAAATAGAATTTTAACACAAAGTTTAGGGCTCACTTATTATTATCACAAGCACAGTTCATCCAAAGCTGCTGCACAACAGCAGAAGTTTGTAGACACAA
GGTGCCATAACACTAGTAGACCACAATATGACGGCAACACACAACCAGACAACACGAAGACACACTGACAGCTCCACTGGAGCACACCCAAGGTACTAGA
GACTTGTGAAACCCAGATACAGAAGCAGCTCCATGGTTAGGCACTTACTGGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGT
TGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT
CACGTTGTCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATACCACCACGCAGGCGGAGCACC
AGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGA
TACCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGAT
CTGCATCTGTAAATACAAAGT