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Detailed information on CNT30141896


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550185Lolium perenneIpomoea triloba19.2955.0887.98233forward
CNT3020733Lolium perenneCitrullus lanatus10.126.5888.52122forward
CNT3047959Lolium perennePrunus dulcis8.8620.0488.79107reverse complement
CNT30221525Lolium perenneHordeum vulgare20.3629.2587.4246forward
CNT30628273Lolium perenneDaucus carota17.835.389.3215forward
CNT30687678Lolium perenneTriticum urartu20.3631.2689.43246forward
CNT30104673Lolium perenneOryza rufipogon18.9632.6789.08229forward

Expression of CNT30141896

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MDKPSNEVKMDSWRMKIITILGPGIAIAGGCDGA*

>peptide 2 (33 aa)
MEQDRDISFRFQTFSAIRKRIRLKRPSLVQTMQ*

>peptide 3 (49 aa)
WKCHGTPIYVETEKIKMATIHFSDRTPNPWNKTEIFHFVFRLFLLSENE*

>peptide 4 (65 aa)
MLFLPILSSCIFWLIRLLHPASGIRNPNLIVTYNCFRGKKHAQKIVVVRSPRTGEPKVSTCPILK*

Sequence

>CNT30141896
CGTGGAAATGCCATGGGACCCCCATATATGTAGAAACAGAAAAGATCAAGATGGCTACCATTCATTTCTCGGATAGGACGCCCAATCCATGGAACAAGAC
AGAGATATTTCATTTCGTTTTCAGACTTTTTCTGCTATCAGAAAACGAATAAGATTAAAAAGGCCATCATTAGTGCAAACAATGCAATAGCTTCTGTAAG
AGCAAAGCCCAAAATGTCATAACCAAATAATTGTTTTGCTAATGATGGATTTCGGGCCACAGAATGAATCAAAGAACTGAACACGTTTCCAATGCTGATA
GCAGCCCCGGCTAAAGCAATTGTAGCAGCTCCGGCACCTATTAATTTCGCTCCTTCTAACATATCGAGTAAATACTGAACTTTGTTTCATGCTTTTTCTT
CCCATTCTATCTTCTTGTATTTTTTGGTTGATTCGTCTTCTCCACCCCGCTAGTGGAATAAGAAACCCTAACCTTATAGTAACTTACAATTGTTTCAGGG
GAAAGAAGCATGCCCAGAAAATTGTCGTTGTGAGGAGTCCAAGGACTGGAGAACCCAAAGTATCTACTTGCCCAATCTTGAAGTAGTGGAAATCAGAGGA
GAAGATCATGAGTTTGATTTCTGGAAACTGGTAATCAGTGGTGCACCAAATTTGAAAAGAGTGGTGATGGACAAGCCATCAAATGAGGTTAAAATGGACA
GTTGGCGCATGAAAATTATCACCATCCTTGGTCCTGGCATAGCCATTGCTGGTGGATGCGATGGAGCATGATACTTCATACATAAGATGACTGTTTGGTT
TGATGTGCTAATGTGCTGAAACGGTTCACAGGTGAAGGAATGGCTGCTACAGTTGTTAGCTGTCACTGAGTTTGTTGCATCACATCAACATGGTCGGCGC
TTTTTATATGCTATGTGCAAAAACTAGTGGTGCCTTAGTCTTGCATTCACATCAGCATGTAATGTAGCAAGATGCTTTTGAATACGTAACCCGGGGAATT
TCAGTTTAATCATCCTAGTATGATTTAAGTCGGATTCCATCCTGCCTTAGCTTTTTCTACATGTGTTTGCTCGGCAGCTCTTGTTCGCCCAGGAGAGTTT
CTGCTCCAAGTATCACCTAAACGTGTATGTTTGTGTGTGTTCCTCAGTTGTGGCTTCAAAAGTATGGCATCACTTGTCCTGATTGAATGCCAAGAAGTTG
ATCTGGAT