CANTATAdb - search

Detailed information on CNT30141830

BLAST search results

BLAST vs Swiss-Prot:
sp|P93822|ERF97_ARATH, E-value = 9e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692625	Lolium perenne	Oryza sativa	11.48	39.91	85.39	89	forward

Expression of CNT30141830

Peptides detected in this lncRNA

>peptide 1 (32 aa)
CNSLLLQCKFTTTQGRCSCLFTIRDSNLVVHG*

Sequence

>CNT30141830
CTTGTAATTCCTTGCTCTTGCAATGCAAGTTTACAACTACACAAGGCAGATGCAGCTGCCTATTTACAATTAGGGACAGTAATTTAGTAGTACACGGCTA
AGCCTAATTAACCCACTGGTACTATTACTGTCTACTGATCCGGCGAATGGACGGACTAAGAAACGAACGAATCGATTGACCGGCTGAAAGTAGGACGTCT
GGTTCTACATAACCATCTCGGCCGGCGGGGGCAGGTTGAGGTCGAACCCGACGCCGACGGCGGGGGACGCCTCGTCGGCGTTCATCACCGACGACGACGA
GGACCCGGAGCTGTCGCTCCGCTCCTCGCTCCAGCCGCCCGGCGCCGGCACGGCGACGGTGACGGCCGCCGCCGTCCTCGGCCTCAGCTCCAGCAGCGCT
TCCGCCGGCGCGGCCGCGAGGAAGGAGTCGTCCCGGGACGACGAGGACGAGGCCGACTCCACGGTGCTGCTACCCGCGCTGGTCGGGGCCGGCGCGGTAG
TCTTGTTGTGGAGGTGGAGGAGCGCGGCGGACGCGGCGGCGGAGGGGGAGGCGGGGGGGAAGTTGGTCTTGGCGGCGGGGCCGCGGAGCCTGCGCGCGGC
GGCGTCGTAGGCGCGCGCGGCCTGGTGGGCGGTGTCGTAGGTGCCGAGCCAGACGCGGGCCTTCCTGACCGGGTCGCGGATCTCCGCCGCGTACCGGCCC
CACGGCCGCTTCCGCACGCCCCGGAGCTTCGGCTCCGCGCCCCAGCAGCCCTTGCTGCCGCCCGCGGGCGCCTGC