Detailed information on CNT30141800


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440667Lolium perenneAegilops tauschii14.8938.9687.19203reverse complement

Expression of CNT30141800

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MYMSARGCQRLCVSAANLSSVFSHFIRLPLSAIFI*

>peptide 2 (36 aa)
MPKWKIFLIPNVVKFRLRHSGQNLDPSCSSLFRISN*

>peptide 3 (54 aa)
MAISTALSHNLLRIQLWLKQYLLRTIHFYGCACSVESKLSSIHARLRTWLQKNS*

>peptide 4 (54 aa)
SLSFYKLITHTTVRSGDVYVGKRLPKVVCVCSKLIFGLLPFHSLASICNIYLIC*

>peptide 5 (34 aa)
MAVRVQLNQSLAQFMHGYGLGCKKIVRNAYEYTT*

>peptide 6 (31 aa)
MHMNIQPRVVGERIDSIMELAKYAVRRVESC*

Sequence

>CNT30141800
GTCACTTTCATTTTATAAATTGATAACTCATACTACTGTCAGAAGTGGAGATGTATATGTCGGCAAGAGGTTGCCAAAGGTTGTGTGTGTCTGCAGCAAA
CTTATCTTCGGTCTTCTCCCATTTCATTCGCTTGCCTCTATCTGCAATATTTATCTGATATGTTGATGTGTTATTTCTTCCTTCTGATGTTGTTCGATGC
TAAATGAGTATAACCTGAAACTAATCTGGTATATGGTGAGGGTTTTGGTTTATATTGATTTGCTTCGCTGACATGCGGTGCTCTTTTCCTGTTGTTCATA
TTATTTATTGCTGCCAATTTATTTTGATTTAGTACCATAATTTTTTTTGCTGTACAAGAGTAATTTTTAATTACCTGTTTTGCATGTAACCGGCGAGCAG
AAGCCAATATTTTTTCATCCCGACGTCTCTTGAGTTTGGACGGCGGCAATCTAGCCATGCCCAAGTGGAAAATATTTCTCATCCCCAATGTTGTGAAGTT
TCGACTACGGCACTCTGGCCAAAACTTGGATCCGTCTTGCAGTAGTCTCTTCCGAATCAGCAATTAAGAGTCAACAGATCCACTGGAGTGTCCCTTCCTC
TTTTGGCCAGAACAAAGTACTCCATGGCCATCTCTACCGCCCTTTCCCATAATCTGCTCAGAATTCAGTTATGGTTGAAGCAATACTTACTTCGAACAAT
CCATTTCTATGGCTGTGCGTGTTCAGTTGAATCAAAGCTTAGCTCAATTCATGCACGGTTACGGACTTGGTTGCAAAAAAATAGTTAGAAATGCATATGA
ATATACAACCTAGAGTTGTAGGAGAGAGAATAGACTCTATTATGGAGTTGGCAAAATACGCAGTAAGGAGGGTGGAATCATGCTAGATCTATACTATAAT
TATATATCCTTAATGTCTATAAGTGGAGTTATCTTTTGTGCAGGTTTCCGCTTTAAGAAATGATTTTAGAATCCGATTCATTCAATAGAAAATTAAAAAA
TATGAAAACAAAATAGAAAAAATATATACCTAGGTTAGAATCATTATGTAATCCGATATATGGAATTCTCTTCTATATAGTTCAGAGTTCCATCATAGAG
TGACCCTACTTCGAAGTGCATCTACCAAATAATCGTATCGCCACTGCAGTGTGCCCCCGCGAGCACCACTGGCACAAGACCTTTGAGGACGTCCACATCA
TCTCACAAGAGGCACAGATTGTTTCATACACTGCACTAGGCCTTTTGTAATGGGAGGCACAGATAGTTTGCGTAGTATGTTTTCTTTGCCTATGTATTGC
ACTATGTAATGGGAACAAGTTGCTTCTTTCATCCACTACTACAACTTTGCGGCTTTTTTCCAG