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Detailed information on CNT30141777


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30338263Lolium perenneEragrostis tef10.0827.0386.6760forward

Expression of CNT30141777

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GYGRPPRRLVGTLGYFMLSKDDRRKAADDRHNERP*

>peptide 2 (61 aa)
AMGGLLVVSSAPLATSCSARTTGARLRMTGTTSALEKPSSCSPPLRSSRHRWRRTPISLAA*

>peptide 3 (85 aa)
MNLLQGTHTSTDIVVYQIDVHPFSVVTESNRRLSKTPEEAEPICLLLYSSRVPVKTIHAMIAIEVLLVDLDGGVDEPGEPEAGAEA

Sequence

>CNT30141777
TGGCTATGGGCGGCCTCCTCGTCGTCTCGTCGGCACCCTTGGCTACTTCATGCTCAGCAAGGACGACAGGCGCAAGGCTGCGGATGACAGGCACAACGAG
CGCCCTTGAAAAGCCCTCGTCCTGCTCACCACCGTTGAGAAGCAGCAGGCATCGATGGAGGCGGACGCCGATCAGCTTAGCTGCTTAGTACTAGTACAAG
TAGAAACCACCATGTAATAATAATGAAACCCCATCCCCTGTCTGGTTCTGGGTGCGCTGTATAAATCTCTGTTTCTGTACTATGTTTTCTCATCAGTGAA
ATATGCAGAGATTTTGCTGAGAATTCAGAGAGCTGTATGAATTTACTGCAAGGTACACACACGTCCACCGATATAGTAGTATATCAGATTGATGTTCATC
CATTTTCTGTAGTAACTGAATCAAACCGTAGATTATCTAAAACGCCTGAAGAAGCAGAGCCTATATGCCTGCTACTCTATTCATCTCGGGTGCCAGTCAA
AACGATCCATGCCATGATCGCTATTGAAGTTCTTCTAGTCGATCTTGACGGAGGAGTAGATGAGCCTGGTGAACCAGAAGCAGGCGCAGAAGCCG