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Detailed information on CNT30141701


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-100

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307860Lolium perenneTriticum aestivum63.8460.5294.21466forward
CNT30723091Lolium perenneTriticum spelta64.3862.2594.26470forward

Expression of CNT30141701

Peptides detected in this lncRNA

>peptide 1 (65 aa)
RSRTHQQRDMQTQQNLKLSSGFTYSFITVQFIATAPRQMFVDKYDITLDNKTAGKEDNRPLDQNN*

>peptide 2 (61 aa)
MRRCWSSGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 3 (45 aa)
MRRCWSGGIPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICK

>peptide 4 (43 aa)
IKNTSATGYADTTEFETKFRVHLFIHHGSIHSYCTTADVCRQI*

Sequence

>CNT30141701
AGATCAAGAACACATCAGCAACGGGATATGCAGACACAACAGAATTTGAAACTAAGTTCAGGGTTCACTTATTCATTCATCACGGTTCAATTCATAGCTA
CTGCACCACGGCAGATGTTTGTAGACAAATATGATATCACACTAGACAACAAAACGGCAGGAAAAGAAGATAATCGACCACTCGACCAGAACAACTGACA
TCCCCAGTGGAGGACACCGAAGACCCCACAGTTGAGAACCCTCAGAGATTGAATCAGCTCCTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGT
GGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCAGTGGGATGCCCTCCTTG
TCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCAC
CACGTAGTCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACG
CTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTA
AGGGTCTTCACAAAGATCTGCATCTGTAAA