Detailed information on CNT30141687


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-167

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191122Lolium perenneSecale cereale76.3467.3892.76884forward
CNT30242826Lolium perenneAvena sativa79.5373.6893.49921forward

Expression of CNT30141687

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQS

>peptide 2 (52 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRSLSTR*

>peptide 3 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 4 (62 aa)
MVRHLLTTTEAEHQVQGGLLLDVVVRQGATVLQLLTSEDQTLLVRRNALLVLDLRLHVVDGV*

>peptide 5 (40 aa)
MVSDDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 6 (32 aa)
YALKFRNKFRTHLFIHSKFKDAASQHKFVDTR*

Sequence

>CNT30141687
TACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGAC
ATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGC
CATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGACCGTCCTCCAG
CTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACC
TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGT
AGTCAGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTTGCCTTCAC
GTTGTCGATGGTGTCCGAGGACTCCACCTCTAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGGAGCCTCAGCACCAGG
TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGGATAC
CCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG
CATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG
ATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCT
TGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACCAGAGTTA