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Detailed information on CNT30141675


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 2e-66

BLAST vs NONCODE:
NONBRAT001321, E-value = 2e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628401Lolium perenneVigna unguiculata14.3338.182.03128forward
CNT30304662Lolium perenneTriticum aestivum36.0662.5294.1322forward
CNT30538358Lolium perenneBrassica napus6.9421.6888.7162reverse complement
CNT30508427Lolium perenneSolanum lycopersicum9.2923.9284.3483forward
CNT30443502Lolium perenneAegilops tauschii38.1955.0994.13341forward
CNT30254935Lolium perenneAvena sativa38.4150.8995.34343forward
CNT30474628Lolium perenneSaccharum spontaneum34.4925.996.1308forward

Expression of CNT30141675

Peptides detected in this lncRNA

>peptide 1 (29 aa)
QPGSVQITQQCNTIKQSYRDEEQEATHNC*

>peptide 2 (38 aa)
NRDQFKLHSNATPLNRVTGMKNRRLHTIANCRNIDNCK*

>peptide 3 (56 aa)
MQRREGTGDEPWWRAASWGPCRRWTCGRSAWYGPWRRSFRVRTWLLRLVDLGNWMRK

Sequence

>CNT30141675
CAACCGGGATCAGTTCAAATTACACAGCAATGCAACACCATTAAACAGAGTTACAGGGATGAAGAACAGGAGGCTACACACAATTGCTAACTGTCGCAAT
ATCGATAACTGTAAATAGCATTCATATGAATTCAGCGGAAACAGAGAAGCGGTTTCTTGTAACTACGGTAAAACATCCAGATCTTTACAACGAAATAAAA
CCTTCCTAACACGACCTAACAAGATCTAAATCCAGAAGGGAACCAACTACGGAATCGCTTGCGTCGACCGCGACCGGGCATCACCGGCCTAGGCGCGCTC
ACCGCGGATGCGGCGGGCGAGCTGAATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCGACGAGG
TAGGCCTCGGCGGCCTCCTGGAGCGCCAGCACGGCGTGGCTCTGGAAGCGGAGGTCCGTCTTGAAGTCCTGCGCGATCTCGCGGACGAGGCGCTGGAAGG
GCAGCTTGCGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGCCACGGTCCCGGGCCTGTAGCGGTGGGGCTTCTTCACGCCGCC
GGTGGTCGGGGCCGACTTCCTCGCCGCCTGCAGCACAGATTCAAACCAAACGTCAATCGATTTCGCAACGAACAATCACCGGCAGACGATTCAAGCAGAC
AACTAGGAGTACAACGGAGAGATGCAGAGACGGGAAGGGACGGGAGACGAACCTTGGTGGCGAGCTGCTTCCTGGGGGCCTTGCCGCCGGTGGACTTGCG
GGCGGTCTGCTTGGTACGGGCCATGGCGCCGCTCCTTCCGAGTTCGAACTTGGCTTCTGCGGCTTGTGGATTTGGGGAACTGGATGAGAAAAG