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Detailed information on CNT30141602


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 9e-89

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30180697Lolium perenneSecale cereale68.0226.7593.4470forward
CNT30668947Lolium perenneTriticum dicoccoides68.3154.594.7472forward
CNT30592842Lolium perenneEragrostis curvula66.5756.5893.91460forward

Expression of CNT30141602

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVRHLLTTTEAEHQVEGGLLLDVVVRKGAAILQLLTSEDEALLVRGDALLVLDLGLHIVNGV*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (55 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSNV

Sequence

>CNT30141602
GTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAAC
AGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCA
CCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGGC
GCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT
GAGGGTCTTGACGAAGATCTGCATGCCACCGCGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCC
TCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCAGAGGACT
CGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACCAGAGTTACAGCAATGTAAA