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Detailed information on CNT30141549


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 2e-68

BLAST vs NONCODE:
NONBRAT001321, E-value = 1e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315797Lolium perenneCorylus avellana55.4942.8181.98283forward
CNT30442726Lolium perenneAegilops tauschii76.8668.2991.33392forward
CNT30358587Lolium perenneLactuca sativa20.218.7682.52103forward

Expression of CNT30141549

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSLGMMVTRLAWMAQSWMSLGMMVTRLAWMAQRLVSSKRPTR*

>peptide 2 (43 aa)
HDLTRSKSRREPTTESLASTATGHHRPRRAHRGCGGRAECPWA*

Sequence

>CNT30141549
CACGACCTAACAAGATCTAAATCCAGAAGGGAACCAACTACGGAATCGCTTGCGTCGACCGCGACCGGGCATCACCGGCCTAGGCGCGCTCACCGCGGAT
GCGGCGGGCGAGCTGAATGTCCTTGGGCATGATGGTGACGCGCTTGGCGTGGATGGCGCAGAGCTGGATGTCCTTGGGCATGATGGTGACGCGCTTGGCG
TGGATGGCGCAGAGGTTGGTGTCCTCGAAGAGGCCGACGAGGTAGGCCTCGGCCGCCTCCTGGAGCGCCAGCACGGCGTGGCTCTGGAACCGCAGGTCCG
TCTTGAAGTCCTGCGCGATCTCGCGGACGAGGCGCTGGAAGGGCAGCTTGCGGATGAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCGCGCAGCGC
CACGGTCCCGGGCCTGTAGCGGTGGGGCTTCTTCACGCCGCCGGTGGTCGGGGCCGACTTCCTCGCCGCCTGCAGCACAGATTCAAACCAAACATGGAAA
AGGACCTGCG