Detailed information on CNT30141533


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30652285Lolium perenneRosa chinensis76.3175.1886.56915forward
CNT30704859Lolium perennePrunus avium76.1575.5286.97913forward

Expression of CNT30141533

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWIFALTLSMVSEDSTSSVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 2 (44 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTR*

>peptide 3 (62 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSRVMVLPVRVFTKICICKYEVEHSYSTANGYLQKY

>peptide 4 (62 aa)
MVRHLLTTTEAEHQVQGGLLLDVVVRQGATVLQLLTSEDQTLLVRRNALLVLDLRLHVVDGV*

>peptide 5 (35 aa)
RYAYALKFRNKFRTHLFIHSKFKDAASQHKFVDTR*

>peptide 6 (31 aa)
MVSDDSTSRVMVLPVRVLTKICIPPRRRSTK*

Sequence

>CNT30141533
CAGATATGCATACGCACTAAAATTTCGTAACAAGTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGAC
ACAAGGTGACATAACACGAGACCACAATACAACAGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGA
GAAACAGTGCCATGGTTAGGCACTTACTGACCACCACGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGAC
CGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGA
CGACTCCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTC
TGGATGTTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT
TCGCCTTCACGTTATCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATACCACCACGGAGGCG
GAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCT
GGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGAAGACTCCACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA
CGAAGATCTGCATACCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCGGCCGTCCTCGAGCTGCTT
GCCAGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGG
GTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGAGCACAGTTACAGCACGGCAAACGGATATCTTCAGAAATAC