Detailed information on CNT30141487


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-137

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30305431Lolium perenneTriticum aestivum73.4558.6493.19675forward
CNT30242302Lolium perenneAvena sativa76.2867.9994.44701forward
CNT30445203Lolium perenneSaccharum spontaneum75.4153.2789.47693forward

Expression of CNT30141487

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 2 (55 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSNV

>peptide 3 (62 aa)
MVRHLLTTTEAEHQVQGGLLLDVVVRQGATVLQLLTSEDQTLLVRRNALLVLDLRLHVVDGV*

>peptide 4 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVMVLPVRVLTKICMPPRRRSTRWRVDSFWML*

Sequence

>CNT30141487
GTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAAC
AGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCA
CCACGGAGGCGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCGAAGATCAGAC
GCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGACGACTCCACCTCCAGGGTGATGGTCTTGCCGGT
GAGGGTCTTGACAAAGATCTGCATGCCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCGTCC
TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGATGACT
CCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGAT
GTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCC
TTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACC
AGAGTTACAGCAATGTAAA