Detailed information on CNT30141474


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-158

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-134

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553813Lolium perenneOryza glaberrima74.8673.5888.81688forward
CNT30242438Lolium perenneAvena sativa76.2875.3894.44701forward
CNT30689773Lolium perenneTriticum urartu76.0648.5494.28699forward
CNT30722025Lolium perenneTriticum spelta73.2375.9693.16673forward
CNT30364833Lolium perenneSorghum bicolor74.9770.3890.28689forward
CNT30148670Lolium perenneBrachypodium distachyon77.1574.7992.81709forward
CNT30100520Lolium perenneOryza rufipogon74.9769.4691.15689forward

Expression of CNT30141474

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MVRHLLTTTEAEHQVEGGLLLDVVVRKGAAILQLLTSEDEALLVRGDALLVLDLGLHIVNGV*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSDDSTSRVMVLPVRVLTKICMPPRSLSTRWRVDSFWML*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILAFTLSMVSEDSTSRVMVLPVRVLTKICMPPRRRRTRWRVDSFWML*

>peptide 4 (55 aa)
MRRCWSGGMPSLSWIFALTLSMVSEDSTSRVMVLPVRVFTKICICKYEVDQSYSNV

Sequence

>CNT30141474
GTTCAGGACTCACTTATTCATTCATTCAAAGTTCAAAGATGCTGCATCACAGCATAAGTTTGTAGACACAAGGTGACATAACACGAGACCACAATACAAC
AGAATCACAGGACCAGACCACCCGAGACACACACCGAAGGAACCAGACTTGTGAACCCCAGGAGAGAGAAACAGTGCCATGGTTAGGCACTTACTGACCA
CCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGGC
GCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT
GAGGGTCTTGACGAAGATCTGCATGCCACCGCGAAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCGTCC
TCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGATGACT
CCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCACCACGGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGAT
GTTGTAGTCAGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCC
TTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGTAAATACGAAGTAGACC
AGAGTTACAGCAATGTAAA