Detailed information on CNT30141453


BLAST search results

BLAST vs Swiss-Prot:
sp|P31922|SUS1_HORVU, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677561Lolium perenneSetaria viridis16.7224.0988.6853forward
CNT30559910Lolium perenneActinidia chinensis16.7224.3188.6853forward
CNT30250827Lolium perenneAvena sativa56.7851.8796.67180forward
CNT30679535Lolium perenneTriticum urartu21.1425.8791.0467forward
CNT30100738Lolium perenneOryza rufipogon21.4518.2385.2968forward

Expression of CNT30141453

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MRLYILLNSACSSLSLDSLPWSPATITRFAKSFR*

>peptide 2 (35 aa)
MFFTRSRRAIEKMIGLFLRDNVELGIEHVNPMDNTV

>peptide 3 (64 aa)
MALQLVLLNETVHPFELSLLLPILGLLAMVTSDNHKVCQILQMSILTEHLNQACHVLHTVKTSH*

Sequence

>CNT30141453
CTCTGCATTGCGAACACGGTTCATCTGAGCTGAGATCCACCGGATATGGCCCTCCAACTTGTACTCCTCAATGAGACTGTACATCCTTTTGAACTCAGCC
TGCTCCTCCCTATCCTTGGACTCCTTGCCATGGTCACCAGCGACAATCACAAGGTTTGCCAAATCCTTCAGATGAGCATTCTTACCGAACATCTCAACCA
AGCCTGTCATGTTCTTCACACGGTCAAGACGAGCCATTGAGAAGATGATAGGCTTGTTCTTGAGAGACAATGTTGAACTTGGGATCGAACACGTCAATCC
CATGGACAACACGGTAG